RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 MRPL15Q9P015 296 aaKnown RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 CRNNQ9UBG3 495 aaPredicted RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 FBXO2Q9UK22 296 aaPredicted RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 PCDHGB4Q9UN71 923 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 WDR83OSQ9Y284 106 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 ZNF510Q9Y2H8 683 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 ARID2Q68CP9 1835 aa1.15□□□□□ -2.22
UBXN4-207ENST00000471246 IGLV3-10A0A075B6K4 115 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 LOC105371242A0A075B767 164 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 TRBV5-5A0A0J9YX44 114 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 A0A1W2PPM1 405 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 A0A1W2PPQ1 181 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 SHISA7A6NL88 538 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 A8MU10 97 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 K7EQD1 137 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 CCL24O00175 119 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 IPO8O15397 1037 aaKnown RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ERAL1O75616 437 aaKnown RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 CEACAM4O75871 244 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 KRT33AO76009 404 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ACSL3O95573 720 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 IGHV2-70P01814 119 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ATP1B1P05026 303 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 HOXD4P09016 255 aaPredicted RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 KRTAP1-4P0C5Y4 121 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 LINGO3P0C6S8 592 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 PRKAR1AP10644 381 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 GP1BBP13224 206 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 FOLR2P14207 255 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 IRF2P14316 349 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 PFKFB1P16118 471 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 PORP16435 677 aaPredicted RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ALOX12P18054 663 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 IL4RP24394 825 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 PDHA2P29803 388 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ETV5P41161 510 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 SOX3P41225 446 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 OR3A2P47893 321 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ALDH3A2P51648 485 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 CLCN4P51793 760 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 VAMP7P51809 220 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF75DP51815 510 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 UBXN2AP68543 259 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 MYL7Q01449 175 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ZFP36L1Q07352 338 aaKnown RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 CUL3Q13618 768 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 CUL4AQ13619 759 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ITGA7Q13683 1181 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 TRIM29Q14134 588 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 IL11RAQ14626 422 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 GPR33Q49SQ1 333 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 MCMDC2Q4G0Z9 681 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 CBWD6Q4V339 395 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 HIGD2BQ4VC39 106 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 RILPL1Q5EBL4 403 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 CBWD3Q5JTY5 395 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 GARNL3Q5VVW2 1013 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ITPRIPL1Q6GPH6 555 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 OR4A47Q6IF82 309 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF841Q6ZN19 808 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 IL17RELQ6ZVW7 336 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ZER1Q7Z7L7 766 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 SLC25A42Q86VD7 318 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 FAM131BQ86XD5 332 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ZFAND4Q86XD8 727 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 DNAAF5Q86Y56 855 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF584Q8IVC4 421 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ABHD12Q8N2K0 398 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 OR4K1Q8NGD4 311 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 PTERQ96BW5 349 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 MOB3AQ96BX8 217 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 TMCO6Q96DC7 493 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 RSRC1Q96IZ7 334 aaKnown RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 FAM71F1Q96KD3 344 aaPredicted RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 C2orf48Q96LS8 159 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF830Q96NB3 372 aaPredicted RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 DGAT2Q96PD7 388 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ABHD1Q96SE0 405 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 OVOL2Q9BRP0 275 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF577Q9BSK1 485 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 MXD3Q9BW11 206 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 PRRG4Q9BZD6 226 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 HOXD1Q9GZZ0 328 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ZMYND12Q9H0C1 365 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 GOLPH3LQ9H4A5 285 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 ANKZF1Q9H8Y5 726 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 PDE7BQ9NP56 450 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 B3GAT2Q9NPZ5 323 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 TBC1D22BQ9NU19 505 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 PRMT7Q9NVM4 692 aaPredicted RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 CPSF2Q9P2I0 782 aaKnown RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 CTSZQ9UBR2 303 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 CHORDC1Q9UHD1 332 aaPredicted RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 SLC24A2Q9UI40 661 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 CPSF3Q9UKF6 684 aaKnown RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 RNF150Q9ULK6 438 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 PPIEQ9UNP9 301 aaKnown RBP1.15□□□□□ -2.23
UBXN4-207ENST00000471246 TMEM5Q9Y2B1 443 aa1.15□□□□□ -2.23
UBXN4-207ENST00000471246 RPS6KL1Q9Y6S9 549 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms