RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CACHD1Q5VU97 1274 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 AFMIDQ63HM1 303 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 ATG9BQ674R7 924 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 SDE2Q6IQ49 451 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 DOK6Q6PKX4 331 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 PRR23CQ6ZRP0 262 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 LAX1Q8IWV1 398 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 FAM217AQ8IXS0 508 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 ST13P5Q8NFI4 369 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-207ENST00000470763 MYLPFQ96A32 169 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 COQ8BQ96D53 544 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 SMARCD1Q96GM5 515 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 MCCC1Q96RQ3 725 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-207ENST00000470763 REEP1Q9H902 201 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 SMURF1Q9HCE7 757 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 TXNRD2Q9NNW7 524 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 TMEM39AQ9NV64 488 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 SAMD4AQ9UPU9 718 aaKnown RBP13.37□□□□□ -0.27
NPHP4-207ENST00000470763 TRBV5-3A0A0A0MS03 114 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 H3BM21 787 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 GFRA2O00451 464 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 AKR7A2O43488 359 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 ZNF780AO75290 641 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-207ENST00000470763 IL6P05231 212 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 FHP07954 510 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 ST3GAL4Q11206 333 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 GTF2H2Q13888 395 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 TAF1CQ15572 869 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-207ENST00000470763 GTF2H2CQ6P1K8 395 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 NKAPQ8N5F7 415 aaKnown RBP13.36□□□□□ -0.27
NPHP4-207ENST00000470763 OR4K2Q8NGD2 314 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 VANGL1Q8TAA9 524 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-207ENST00000470763 TMEM40Q8WWA1 233 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 PPP3R2Q96LZ3 170 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 VPS35Q96QK1 796 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 ABCB8Q9NUT2 735 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 SPASTQ9UBP0 616 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 PCDHGB2Q9Y5G2 931 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 A0A0B4J293 547 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 LOC285095A0A1B0GVY8 99 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 MEIS3P2A8K0S8 358 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 UGT2B17O75795 530 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 UQCRC1P31930 480 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 GDF5P43026 501 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 HSPA7P48741 367 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 IL2P60568 153 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 EFR3AQ14156 821 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 CDONQ4KMG0 1287 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 ALFQ53S48 1182 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 RNF31Q96EP0 1072 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 TPD52L3Q96J77 140 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 PITX2Q99697 317 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 NARFLQ9H6Q4 476 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 COQ3Q9NZJ6 369 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 CFL2Q9Y281 166 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 CCL27Q9Y4X3 112 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 EFCAB10A6NFE3 127 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 CDK2AP1O14519 115 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 GPR39O43194 453 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 SCO1O75880 301 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 COL6A1P12109 1028 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 TIE1P35590 1138 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 HOXC5Q00444 222 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 FCHO2Q0JRZ9 810 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 SMARCB1Q12824 385 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 DOC2BQ14184 412 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 ZNF79Q15937 498 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 PIANPQ8IYJ0 282 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 PAF1Q8N7H5 531 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 OMA1Q96E52 524 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 HSH2DQ96JZ2 352 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 HRASLS5Q96KN8 279 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 DPH2Q9BQC3 489 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-207ENST00000470763 CNPPD1Q9BV87 410 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 CLMPQ9H6B4 373 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 UBA2Q9UBT2 640 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-207ENST00000470763 V9GYH0 126 aa13.36□□□□□ -0.27
NPHP4-207ENST00000470763 CCDC182A6NF36 153 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 VPS26AO75436 327 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 LRATO95237 230 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 IGLV3-25P01717 112 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 AFF1P51825 1210 aaKnown RBP13.35□□□□□ -0.27
NPHP4-207ENST00000470763 PAN2Q504Q3 1202 aaKnown RBP13.35□□□□□ -0.27
NPHP4-207ENST00000470763 PIK3R6Q5UE93 754 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 FAAH2Q6GMR7 532 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 PDE12Q6L8Q7 609 aaKnown RBP13.35□□□□□ -0.27
NPHP4-207ENST00000470763 PSAPL1Q6NUJ1 521 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 CIR1Q86X95 450 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-207ENST00000470763 CD99L2Q8TCZ2 262 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 UTP15Q8TED0 518 aaKnown RBP13.35□□□□□ -0.27
NPHP4-207ENST00000470763 ASB15Q8WXK1 588 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 UCK2Q9BZX2 261 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 DYRK4Q9NR20 520 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 TEKT2Q9UIF3 430 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 PTGESO14684 152 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 GPR32O75388 356 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 CCNDBP1O95273 360 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 CCNYL3P0C7X3 344 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 KCNE1P15382 129 aa13.35□□□□□ -0.27
NPHP4-207ENST00000470763 INO80DQ53TQ3 878 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms