RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 HUS1BQ8NHY5 278 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 NUDT8Q8WV74 236 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 ROPN1LQ96C74 230 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 WDR34Q96EX3 536 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 APOLD1Q96LR9 279 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 TMEM168Q9H0V1 697 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 TMEM45AQ9NWC5 275 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 GEMIN8Q9NWZ8 242 aaKnown RBP17.51■□□□□ 0.39
SMC4-211ENST00000469858 SCHIP1Q9P0W5 487 aaPredicted RBP17.51■□□□□ 0.39
SMC4-211ENST00000469858 TBC1D29Q9UFV1 150 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 POMPQ9Y244 141 aa17.51■□□□□ 0.39
SMC4-211ENST00000469858 IGHV1OR15-9A0A0B4J2B8 117 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 PIPSLA2A3N6 862 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 ASPDHA6ND91 283 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 H0Y3Z8 333 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 STK25O00506 426 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 TNFRSF10CO14798 259 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 BCKDHAP12694 445 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 RABIFP47224 123 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 ACTR3P61158 418 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 YBX1P67809 324 aaKnown RBP17.5■□□□□ 0.39
SMC4-211ENST00000469858 RPE65Q16518 533 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 ALG11Q2TAA5 492 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 USP39Q53GS9 565 aaKnown RBP17.5■□□□□ 0.39
SMC4-211ENST00000469858 SLC30A9Q6PML9 568 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 ABI3BPQ7Z7G0 1075 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 HID1Q8IV36 788 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 SMPDL3AQ92484 453 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 STMN2Q93045 179 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 REPS1Q96D71 796 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 DPY30Q9C005 99 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 SPNS1Q9H2V7 528 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 EHD1Q9H4M9 534 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 XKR8Q9H6D3 395 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 SPATA6Q9NWH7 488 aaPredicted RBP17.5■□□□□ 0.39
SMC4-211ENST00000469858 VPS29Q9UBQ0 182 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 DMTF1Q9Y222 760 aa17.5■□□□□ 0.39
SMC4-211ENST00000469858 PRAMEF33A0A0G2JMD5 474 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 NPIPB8E9PQR5 432 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 SH3BGRLO75368 114 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 AMD1P17707 334 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 PSMB5P28074 263 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 ACTR1BP42025 376 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 ACTR1AP61163 376 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 CEACAM7Q14002 265 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 COQ5Q5HYK3 327 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 C17orf64Q86WR6 236 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 SLC22A18ASQ8N1D0 253 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 LINC01555Q8NAE3 123 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 NELL2Q99435 816 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 ZBTB18Q99592 522 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 MVB12BQ9H7P6 319 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 TBC1D17Q9HA65 648 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 RNPEPL1Q9HAU8 725 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 BRF2Q9HAW0 419 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 SPAG4Q9NPE6 437 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.49■□□□□ 0.39
SMC4-211ENST00000469858 TMED5Q9Y3A6 229 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 EEDO75530 441 aaKnown RBP17.49■□□□□ 0.39
SMC4-211ENST00000469858 EML2O95834 649 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 MTHFD1P11586 935 aaKnown RBP17.49■□□□□ 0.39
SMC4-211ENST00000469858 HSD3B1P14060 373 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 HSD3B2P26439 372 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 RAB28P51157 221 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 HIST2H2ACQ16777 129 aaPredicted RBP17.49■□□□□ 0.39
SMC4-211ENST00000469858 ZNF423Q2M1K9 1284 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 PAGE3Q5JUK9 113 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 HIST2H2AA3Q6FI13 130 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 C8orf82Q6P1X6 216 aaPredicted RBP17.49■□□□□ 0.39
SMC4-211ENST00000469858 PHACTR4Q8IZ21 702 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 KRTCAP2Q8N6L1 136 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 OR52E1Q8NGJ3 308 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 CAAP1Q9H8G2 361 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 GID8Q9NWU2 228 aa17.49■□□□□ 0.39
SMC4-211ENST00000469858 LEF1Q9UJU2 399 aaPredicted RBP17.49■□□□□ 0.39
SMC4-211ENST00000469858 A0A1W2PPV9 198 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 TOR1BO14657 336 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 KRT36O76013 467 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 ETHE1O95571 254 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 MAPK1P28482 360 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 MSX2P35548 267 aaPredicted RBP17.48■□□□□ 0.39
SMC4-211ENST00000469858 DGKQP52824 942 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 RPS13P62277 151 aaKnown RBP17.48■□□□□ 0.39
SMC4-211ENST00000469858 LAPTM5Q13571 262 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 NFYCQ13952 458 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 CAPRIN1Q14444 709 aaKnown RBP17.48■□□□□ 0.39
SMC4-211ENST00000469858 ZNF740Q8NDX6 193 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 TSSK3Q96PN8 268 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 EBPLQ9BY08 206 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 NKX1-2Q9UD57 310 aaPredicted RBP17.48■□□□□ 0.39
SMC4-211ENST00000469858 HEBP2Q9Y5Z4 205 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 A0A1W2PPC4 97 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 PRPS2P11908 318 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 SDC1P18827 310 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 TCN1P20061 433 aaPredicted RBP17.48■□□□□ 0.39
SMC4-211ENST00000469858 PKLRP30613 574 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 SLC7A2P52569 658 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 TLR1Q15399 786 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 CCDC6Q16204 474 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 NOXRED1Q6NXP6 359 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms