RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 HS6ST2Q96MM7 605 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 BCL7BQ9BQE9 202 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 PCDHAC1Q9H158 963 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 ZNF768Q9H5H4 540 aaKnown RBP9.69□□□□□ -0.86
NUP50-214ENST00000469163 SAGE1Q9NXZ1 904 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 TBX21Q9UL17 535 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 A0A1B0GV90 55 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 ABHD14A-ACY1A0A1B0GW23 586 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 A6NCN8 305 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 E9PAM4 449 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 APOC4-APOC2K7ER74 178 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 FSCN2O14926 492 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 PMM2O15305 246 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 APOC2P02655 101 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 PRG2P13727 222 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 ARCN1P48444 511 aaKnown RBP9.69□□□□□ -0.86
NUP50-214ENST00000469163 GBX2P52951 348 aaPredicted RBP9.69□□□□□ -0.86
NUP50-214ENST00000469163 DGCR6Q14129 220 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 FNBP1LQ5T0N5 605 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 RNF219Q5W0B1 726 aaPredicted RBP9.69□□□□□ -0.86
NUP50-214ENST00000469163 ARHGAP17Q68EM7 881 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 FBXL22Q6P050 247 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 SUSD1Q6UWL2 747 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 RANBP10Q6VN20 620 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 NRARPQ7Z6K4 114 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 AVL9Q8NBF6 648 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 OR6C4Q8NGE1 309 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 PNPT1Q8TCS8 783 aaKnown RBP9.69□□□□□ -0.86
NUP50-214ENST00000469163 HEXDCQ8WVB3 486 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 RAB7BQ96AH8 199 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 CNDP2Q96KP4 475 aaKnown RBP9.69□□□□□ -0.86
NUP50-214ENST00000469163 LENG8Q96PV6 779 aaPredicted RBP9.69□□□□□ -0.86
NUP50-214ENST00000469163 FAM129BQ96TA1 746 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 PRDM9Q9NQV7 894 aa9.69□□□□□ -0.86
NUP50-214ENST00000469163 FCF1Q9Y324 198 aaKnown RBP9.69□□□□□ -0.86
NUP50-214ENST00000469163 MEIOCA2RUB1 952 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 GABRDO14764 452 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 TO15178 435 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 C1RP00736 705 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 PTAFRP25105 342 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 FNTBP49356 437 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 TEAD2Q15562 447 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 SSX2Q16385 188 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 SETMARQ53H47 684 aaPredicted RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 ARMC12Q5T9G4 340 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 TXNDC11Q6PKC3 985 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 NAPRTQ6XQN6 538 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 IKBIPQ70UQ0 350 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 APBB2Q92870 758 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 SERPINB11Q96P15 392 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 NEDD4LQ96PU5 975 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 RTKNQ9BST9 563 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 C1QTNF6Q9BXI9 259 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 GPR63Q9BZJ6 419 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 SLC19A3Q9BZV2 496 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 C20orf27Q9GZN8 174 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 LINC00597Q9H2U6 94 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 CLDND1Q9NY35 253 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 ABCG2Q9UNQ0 655 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 KLF2Q9Y5W3 355 aaPredicted RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 CHD9Q3L8U1 2897 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 LCTP09848 1927 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 A0A1B0GTQ1 180 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 COCHO43405 550 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 WBP4O75554 376 aaKnown RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 CPNE6O95741 557 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 HAPLN1P10915 354 aaPredicted RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 LAG3P18627 525 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 XPAP23025 273 aaPredicted RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 CAPGP40121 348 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 GARSP41250 739 aaKnown RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 ETV4P43268 484 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 PGDP52209 483 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 KCNK10P57789 538 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 NKX3-2P78367 333 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 PITRM1Q5JRX3 1037 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 CDKL3Q8IVW4 592 aaPredicted RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 ZCCHC9Q8N567 271 aaKnown RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 DNAJC5GQ8N7S2 189 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 PIWIL2Q8TC59 973 aaKnown RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 SPPL2BQ8TCT7 592 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 ADAMTS14Q8WXS8 1223 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 IGSF8Q969P0 613 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 WBP2Q969T9 261 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 HMCESQ96FZ2 354 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 SERAC1Q96JX3 654 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 PPIL3Q9H2H8 161 aaKnown RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 PRMT8Q9NR22 394 aaPredicted RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 CLEC4AQ9UMR7 237 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 CCL26Q9Y258 94 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 HS3ST4Q9Y661 456 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 PTGES3LE9PB15 166 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 K7ERQ8 282 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 FPGTO14772 594 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 TMEM63AO94886 807 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 DDX6P26196 483 aaKnown RBP eCLIP9.68□□□□□ -0.86
NUP50-214ENST00000469163 NUP62P37198 522 aaPredicted RBP9.68□□□□□ -0.86
NUP50-214ENST00000469163 ARSDP51689 593 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 DSC2Q02487 901 aa9.68□□□□□ -0.86
NUP50-214ENST00000469163 GPR17Q13304 367 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms