RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 FANCEQ9HB96 536 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 SYTL2Q9HCH5 934 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 PPANQ9NQ55 473 aaKnown RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 PIH1D3Q9NQM4 214 aaKnown RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 CENPMQ9NSP4 180 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 FAM118AQ9NWS6 357 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 CHCHD3Q9NX63 227 aaKnown RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 GDE1Q9NZC3 331 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 ANKMY1Q9P2S6 941 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 FAM153AQ9UHL3 310 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 ATP6V1HQ9UI12 483 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 TEKT2Q9UIF3 430 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 ITGA11Q9UKX5 1188 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 GRID1Q9ULK0 1009 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 LIPGQ9Y5X9 500 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 KDRP35968 1356 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.54□□□□□ -1.84
VPS50-209ENST00000467326 ACEP12821 1306 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 IGLV5-45A0A087WSX0 123 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 A0A087WV48 116 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 A0A1W2PP11 408 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 SMIM30A4D0T7 59 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 ZSCAN5CA6NGD5 496 aaPredicted RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 H0YIV9 168 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 ADAMDEC1O15204 470 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 SPOPO43791 374 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 NUDT21O43809 227 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 SSX5O60225 188 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 MITFO75030 526 aaPredicted RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 MTRF1O75570 445 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 CRCPO75575 148 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 SLITRK3O94933 977 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 AKR7A3O95154 331 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 GAS8-AS1O95177 125 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 DIRAS3O95661 229 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 GBAP04062 536 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 ICAM1P05362 532 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 PRSS1P07477 247 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 ZFYP08048 801 aaPredicted RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 CSF2RAP15509 400 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 TRIM21P19474 475 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 AHCYP23526 432 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 PON1P27169 355 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 RPA1P27694 616 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 CHRNA3P32297 505 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 TIMP3P35625 211 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 PITPNBP48739 271 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 TRA2BP62995 288 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 TFAP4Q01664 338 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 CHIT1Q13231 466 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 WDR43Q15061 677 aaKnown RBP eCLIP3.54□□□□□ -1.84
VPS50-209ENST00000467326 UGP2Q16851 508 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 SOWAHCQ53LP3 525 aaPredicted RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 FASTKD1Q53R41 847 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 CCNYL2Q5T2Q4 361 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 LCN10Q6JVE6 187 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 ZYG11AQ6WRX3 759 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 C15orf39Q6ZRI6 1047 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 ATG9AQ7Z3C6 839 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 CDH26Q8IXH8 852 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 PM20D2Q8IYS1 436 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 FAM133AQ8N9E0 248 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 OR6C4Q8NGE1 309 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 PPP4R1Q8TF05 950 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 TEKT4Q8WW24 435 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 LRRC59Q96AG4 307 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 PHF21AQ96BD5 680 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 SPACA9Q96E40 222 aaPredicted RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 FBXO17Q96EF6 278 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 ARSGQ96EG1 525 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 DTNBP1Q96EV8 351 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 C5orf30Q96GV9 206 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 ST6GAL2Q96JF0 529 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 ZNF354BQ96LW1 612 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 RBM14Q96PK6 669 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 SMC6Q96SB8 1091 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 NAP1L3Q99457 506 aaPredicted RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 SEPT5Q99719 369 aaPredicted RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 HNRNPABQ99729 332 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 SRSF8Q9BRL6 282 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 TPPP3Q9BW30 176 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 NACAP1Q9BZK3 213 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 LRRCC1Q9C099 1032 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 MTMR12Q9C0I1 747 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 LRMDAQ9H2I8 198 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 MAGIXQ9H6Y5 334 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 COQ10BQ9H8M1 238 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 UPF2Q9HAU5 1272 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 CRLF2Q9HC73 371 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 TUFT1Q9NNX1 390 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 NGBQ9NPG2 151 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 PRMT8Q9NR22 394 aaPredicted RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 DNAJC17Q9NVM6 304 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 SPASTQ9UBP0 616 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 IL17BQ9UHF5 180 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 MTUS1Q9ULD2 1270 aa3.54□□□□□ -1.84
VPS50-209ENST00000467326 R3HDM2Q9Y2K5 976 aaKnown RBP3.54□□□□□ -1.84
VPS50-209ENST00000467326 MROH5Q6ZUA9 1318 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 TRBV2A0A0J9YWF9 115 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 ARHGAP42A6NI28 874 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms