RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TSG101Q99816 390 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 NAA15Q9BXJ9 866 aaKnown RBP5.29□□□□□ -1.56
PTCD3-207ENST00000467273 NLNQ9BYT8 704 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 LDAHQ9H6V9 325 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 SYNCQ9H7C4 482 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 RMI1Q9H9A7 625 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 MCCC2Q9HCC0 563 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 WASH6PQ9NQA3 447 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 NKIRAS2Q9NYR9 191 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 VPS18Q9P253 973 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 CPNE7Q9UBL6 633 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 LHX3Q9UBR4 397 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 CNOT8Q9UFF9 292 aaKnown RBP5.29□□□□□ -1.56
PTCD3-207ENST00000467273 RARRES3Q9UL19 164 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 NTNG1Q9Y2I2 539 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 PLEKHM1Q9Y4G2 1056 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 FER1L5A0AVI2 2057 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 NSD1Q96L73 2696 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 TMEM200CA6NKL6 621 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 INSIG1O15503 277 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 SGTAO43765 313 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 RASSF9O75901 435 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 NADKO95544 446 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 JCHAINP01591 159 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 AMY1AP04745 511 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 KLK3P07288 261 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 ADH4P08319 380 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 CD63P08962 238 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 XRCC1P18887 633 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 HADHAP40939 763 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 TSFMP43897 325 aaKnown RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 CAPZBP47756 277 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 GABRB2P47870 512 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 ARCN1P48444 511 aaKnown RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 RPS18P62269 152 aaKnown RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 MPP1Q00013 466 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 BCL2L1Q07817 233 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 RFTN1Q14699 578 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 CNN3Q15417 329 aaKnown RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 ASIC2Q16515 512 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 TUBB8Q3ZCM7 444 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 KHDC1Q4VXA5 237 aaKnown RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 ARMC4Q5T2S8 1044 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 THEMIS2Q5TEJ8 643 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 RNF220Q5VTB9 566 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 FAAH2Q6GMR7 532 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 PWWP2BQ6NUJ5 590 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 RWDD4Q6NW29 188 aaKnown RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 DPY19L2P1Q6NXN4 242 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 DARS2Q6PI48 645 aaKnown RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 RRAGAQ7L523 313 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 FJX1Q86VR8 437 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 RAB43Q86YS6 212 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 CAMK1DQ8IU85 385 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 PELI3Q8N2H9 469 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 WDTC1Q8N5D0 677 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 LILRA3Q8N6C8 439 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 RTL3Q8N8U3 475 aaKnown RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 SIDT2Q8NBJ9 832 aaKnown RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 CLEC1AQ8NC01 280 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 CHDHQ8NE62 594 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 PPP4R1Q8TF05 950 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 INPP5DQ92835 1189 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 GCDHQ92947 438 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 AJUBAQ96IF1 538 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 SLC41A2Q96JW4 573 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 MRGPRX4Q96LA9 322 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 TBCBQ99426 244 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 CD180Q99467 661 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 VRK1Q99986 396 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 C17orf62Q9BQA9 187 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 MANSC1Q9H8J5 431 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 BCO1Q9HAY6 547 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 OGFRQ9NZT2 677 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 RABL2AQ9UBK7 228 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 UBA2Q9UBT2 640 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-207ENST00000467273 TBC1D29Q9UFV1 150 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 TRPS1Q9UHF7 1281 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 PCDHA7Q9UN72 937 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 SNX7Q9UNH6 387 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 NEU3Q9UQ49 428 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 MTMR6Q9Y217 621 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 PCDHA3Q9Y5H8 950 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 SNX10Q9Y5X0 201 aa5.28□□□□□ -1.56
PTCD3-207ENST00000467273 A0A0U1RQS6 177 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 SYNDIG1LA6NDD5 238 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 A6NL46 340 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 FAM25EA8MYX2 175 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 GPR89AB7ZAQ6 455 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 TRAFD1O14545 582 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-207ENST00000467273 SLC16A6O15403 523 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 SOCS5O75159 536 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 HEXIM1O94992 359 aaKnown RBP5.27□□□□□ -1.57
PTCD3-207ENST00000467273 CALCAP01258 141 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 ERBB2P04626 1255 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 GPR89BP0CG08 455 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 CYP2A6P11509 494 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-207ENST00000467273 HSD3B1P14060 373 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 AMD1P17707 334 aa5.27□□□□□ -1.57
PTCD3-207ENST00000467273 HPDP32754 393 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms