RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CSE1LP55060 971 aaKnown RBP11.56□□□□□ -0.56
UBR4-211ENST00000467272 GDF10P55107 478 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 ARF3P61204 181 aaPredicted RBP11.56□□□□□ -0.56
UBR4-211ENST00000467272 RELAQ04206 551 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 EEF1A2Q05639 463 aaKnown RBP11.56□□□□□ -0.56
UBR4-211ENST00000467272 KLF1Q13351 362 aaPredicted RBP11.56□□□□□ -0.56
UBR4-211ENST00000467272 GBX1Q14549 363 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 CCDC38Q502W7 563 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 AADACL2Q6P093 401 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 CDH24Q86UP0 819 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 PAQR7Q86WK9 346 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 SPPL2CQ8IUH8 684 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 SHISA5Q8N114 240 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 FAM71DQ8N9W8 422 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 HDAC10Q969S8 669 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 RAD51AP1Q96B01 352 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 SCMH1Q96GD3 660 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 OR2A5Q96R48 311 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 DMRTA2Q96SC8 542 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 MIPEPQ99797 713 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 ZFYVE21Q9BQ24 234 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 TRIM51Q9BSJ1 452 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 TUBB6Q9BUF5 446 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.56□□□□□ -0.56
UBR4-211ENST00000467272 MKKSQ9NPJ1 570 aaPredicted RBP11.56□□□□□ -0.56
UBR4-211ENST00000467272 STMN3Q9NZ72 180 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 ITGB1BP2Q9UKP3 347 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 RUVBL1Q9Y265 456 aaKnown RBP11.56□□□□□ -0.56
UBR4-211ENST00000467272 NFS1Q9Y697 457 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 FAM169AQ9Y6X4 670 aa11.56□□□□□ -0.56
UBR4-211ENST00000467272 FFAR3O14843 346 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 GPR42O15529 346 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 PHF2O75151 1096 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 WFS1O76024 890 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 MATN4O95460 622 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 CYC1P08574 325 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 ICAM2P13598 275 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 CTNNA2P26232 953 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 SMSP52788 366 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 RBPJQ06330 500 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 FASTKQ14296 549 aaKnown RBP11.55□□□□□ -0.56
UBR4-211ENST00000467272 KRTCAP3Q53RY4 240 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 TSTD2Q5T7W7 516 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 GARNL3Q5VVW2 1013 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 PLAG1Q6DJT9 500 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 ZNF425Q6IV72 752 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 AFTPHQ6ULP2 937 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 NEK10Q6ZWH5 1172 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 FGD2Q7Z6J4 655 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 OR4L1Q8NH43 312 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 SLC35B2Q8TB61 432 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 PHF10Q8WUB8 498 aaKnown RBP11.55□□□□□ -0.56
UBR4-211ENST00000467272 PEX13Q92968 403 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 PLCD4Q9BRC7 762 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 TMEM121Q9BTD3 319 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 MARCH4Q9P2E8 410 aaPredicted RBP11.55□□□□□ -0.56
UBR4-211ENST00000467272 TRPC4Q9UBN4 977 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 CDC14AQ9UNH5 594 aa11.55□□□□□ -0.56
UBR4-211ENST00000467272 HRNRQ86YZ3 2850 aaPredicted RBP11.55□□□□□ -0.56
UBR4-211ENST00000467272 A0A0U1RQJ8 604 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 APOA4P06727 396 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 CXCR2P25025 360 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 GRIA1P42261 906 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 MAGEA1P43355 309 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 AP2B1P63010 937 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 TUBA3CQ13748 450 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 LONRF1Q17RB8 773 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 HKDC1Q2TB90 917 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 P3H1Q32P28 736 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 ZNF766Q5HY98 468 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 ACER2Q5QJU3 275 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 TUBA3EQ6PEY2 450 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 NCCRP1Q6ZVX7 275 aaPredicted RBP11.54□□□□□ -0.56
UBR4-211ENST00000467272 KRT222Q8N1A0 295 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 LRRC57Q8N9N7 239 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 OR52K1Q8NGK4 314 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 CFAP61Q8NHU2 1237 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 LRRC45Q96CN5 670 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 FRMD6Q96NE9 622 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 SIGLEC12Q96PQ1 595 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 DPH7Q9BTV6 452 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 SPATA7Q9P0W8 599 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 SH3BGRL2Q9UJC5 107 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 SLC39A10Q9ULF5 831 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 MKL2Q9ULH7 1088 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 R3HDM2Q9Y2K5 976 aaKnown RBP11.54□□□□□ -0.56
UBR4-211ENST00000467272 ASB1Q9Y576 335 aa11.54□□□□□ -0.56
UBR4-211ENST00000467272 NSD1Q96L73 2696 aaPredicted RBP11.54□□□□□ -0.56
UBR4-211ENST00000467272 FLNAP21333 2647 aaKnown RBP11.53□□□□□ -0.56
UBR4-211ENST00000467272 ERI2A8K979 691 aaKnown RBP11.53□□□□□ -0.56
UBR4-211ENST00000467272 F8W8V4 182 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 GOLGA6L19H0YKK7 550 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 PRMT5O14744 637 aaPredicted RBP11.53□□□□□ -0.56
UBR4-211ENST00000467272 P2RX6O15547 441 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 PRPF4O43172 522 aaKnown RBP eCLIP11.53□□□□□ -0.56
UBR4-211ENST00000467272 PSMD3O43242 534 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 MAN1A2O60476 641 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 TJP3O95049 919 aa11.53□□□□□ -0.56
UBR4-211ENST00000467272 TPM3P06753 285 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms