RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 FASTKD5Q7L8L6 764 aaKnown RBP3.09□□□□□ -1.91
XRN1-206ENST00000467077 GALNT5Q7Z7M9 940 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 PLD3Q8IV08 490 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 ARID3BQ8IVW6 561 aaPredicted RBP3.09□□□□□ -1.91
XRN1-206ENST00000467077 Q8N377 158 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 L3MBTL4Q8NA19 623 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 OR2T12Q8NG77 320 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 USP6NLQ92738 828 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 SLC47A1Q96FL8 570 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 PGAM5Q96HS1 289 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 DACH2Q96NX9 599 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 SLC22A12Q96S37 553 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 C1QTNF1Q9BXJ1 281 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 ZNF71Q9NQZ8 489 aaPredicted RBP3.09□□□□□ -1.91
XRN1-206ENST00000467077 MIOSQ9NXC5 875 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 FBXL17Q9UF56 701 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 ZDHHC2Q9UIJ5 367 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 NENFQ9UMX5 172 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 KNSTRNQ9Y448 316 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 LYVE1Q9Y5Y7 322 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.09□□□□□ -1.91
XRN1-206ENST00000467077 MAP3K15Q6ZN16 1313 aa3.09□□□□□ -1.91
XRN1-206ENST00000467077 CEMIPQ8WUJ3 1361 aa3.09□□□□□ -1.92
XRN1-206ENST00000467077 IBTKQ9P2D0 1353 aaPredicted RBP3.09□□□□□ -1.92
XRN1-206ENST00000467077 RANBP2P49792 3224 aaKnown RBP3.09□□□□□ -1.92
XRN1-206ENST00000467077 MGAMO43451 1857 aa3.09□□□□□ -1.92
XRN1-206ENST00000467077 MAGEB17A8MXT2 336 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 PLOD2O00469 737 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 DOK2O60496 412 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 ZBED4O75132 1171 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 PTP4A3O75365 173 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 CSPG5O95196 566 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 ACADMP11310 421 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 RPS12P25398 132 aaKnown RBP3.08□□□□□ -1.92
XRN1-206ENST00000467077 EPHA2P29317 976 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 CDH8P55286 799 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 ARF3P61204 181 aaPredicted RBP3.08□□□□□ -1.92
XRN1-206ENST00000467077 ARF1P84077 181 aaKnown RBP3.08□□□□□ -1.92
XRN1-206ENST00000467077 PPP2R2BQ00005 443 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 PARP10Q53GL7 1025 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 FASTKD1Q53R41 847 aaKnown RBP3.08□□□□□ -1.92
XRN1-206ENST00000467077 ITPRIPL1Q6GPH6 555 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 GPRIN3Q6ZVF9 776 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 CHST9Q7L1S5 443 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 MCM10Q7L590 875 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 GPALPP1Q8IXQ4 340 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 SCYL3Q8IZE3 742 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 CRYBG2Q8N1P7 616 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 CD99L2Q8TCZ2 262 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 SCFD2Q8WU76 684 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 ERO1AQ96HE7 468 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 ZNF582Q96NG8 517 aaPredicted RBP3.08□□□□□ -1.92
XRN1-206ENST00000467077 TREX2Q9BQ50 279 aaPredicted RBP3.08□□□□□ -1.92
XRN1-206ENST00000467077 RHNO1Q9BSD3 238 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 LRRC61Q9BV99 259 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 UTP14AQ9BVJ6 771 aaKnown RBP3.08□□□□□ -1.92
XRN1-206ENST00000467077 TRIM6Q9C030 488 aaPredicted RBP3.08□□□□□ -1.92
XRN1-206ENST00000467077 SLA2Q9H6Q3 261 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 DNAJC18Q9H819 358 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 MYOZ2Q9NPC6 264 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 SEPT11Q9NVA2 429 aaKnown RBP3.08□□□□□ -1.92
XRN1-206ENST00000467077 MIS18AQ9NYP9 233 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 COQ3Q9NZJ6 369 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 LAS1LQ9Y4W2 734 aaKnown RBP3.08□□□□□ -1.92
XRN1-206ENST00000467077 MYH3P11055 1940 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 COL4A1P02462 1669 aa3.08□□□□□ -1.92
XRN1-206ENST00000467077 ALPK3Q96L96 1907 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 VCANP13611 3396 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 A0A1W2PR77 199 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 FSD2A1L4K1 749 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 ANKRD18BA2A2Z9 1011 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 NDUFS4O43181 175 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 TRMUO75648 421 aaKnown RBP3.07□□□□□ -1.92
XRN1-206ENST00000467077 RB1P06400 928 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 H1F0P07305 194 aaKnown RBP3.07□□□□□ -1.92
XRN1-206ENST00000467077 PRKAR2BP31323 418 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 WNT5AP41221 380 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 LIMK2P53671 638 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 PRKAA1Q13131 559 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 EIF4EBP2Q13542 120 aaPredicted RBP3.07□□□□□ -1.92
XRN1-206ENST00000467077 SLC10A5Q5PT55 438 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 FAM205BPQ63HN1 556 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 ADALQ6DHV7 355 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 FAM166AQ6J272 317 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 KLC3Q6P597 504 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 PCGF5Q86SE9 256 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 ISCA2Q86U28 154 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 TBC1D16Q8TBP0 767 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 RASL10AQ92737 203 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 SRSF8Q9BRL6 282 aaKnown RBP3.07□□□□□ -1.92
XRN1-206ENST00000467077 EIF2B3Q9NR50 452 aaKnown RBP3.07□□□□□ -1.92
XRN1-206ENST00000467077 ECHDC1Q9NTX5 307 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 POLLQ9UGP5 575 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 RTL9Q8NET4 1388 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 ZNF609O15014 1411 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 LAMA3Q16787 3333 aa3.07□□□□□ -1.92
XRN1-206ENST00000467077 OR6C76A6NM76 312 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 CDRT15L2A8MXV6 281 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 HMGB1P1B2RPK0 211 aaPredicted RBP3.06□□□□□ -1.92
XRN1-206ENST00000467077 UFL1O94874 794 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms