RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CAPZA1P52907 286 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 PTGISQ16647 500 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 XKR3Q5GH77 459 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 FFAR4Q5NUL3 377 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 SPOUT1Q5T280 376 aaKnown RBP3.79□□□□□ -1.8
LRCH3-211ENST00000466054 LCN1P1Q5VSP4 162 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 IL17RELQ6ZVW7 336 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 DNAJB7Q7Z6W7 309 aaPredicted RBP3.79□□□□□ -1.8
LRCH3-211ENST00000466054 DDHD1Q8NEL9 900 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 OR4C3Q8NH37 302 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 KCNE4Q8WWG9 221 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 SPATA33Q96N06 139 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 KATNB1Q9BVA0 655 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 GTPBP2Q9BX10 602 aaKnown RBP3.79□□□□□ -1.8
LRCH3-211ENST00000466054 FAM49AQ9H0Q0 323 aaPredicted RBP3.79□□□□□ -1.8
LRCH3-211ENST00000466054 INTS10Q9NVR2 710 aaKnown RBP3.79□□□□□ -1.8
LRCH3-211ENST00000466054 DDX43Q9NXZ2 648 aaKnown RBP3.79□□□□□ -1.8
LRCH3-211ENST00000466054 C19orf25Q9UFG5 118 aaPredicted RBP3.79□□□□□ -1.8
LRCH3-211ENST00000466054 TNNQ9UQP3 1299 aa3.79□□□□□ -1.8
LRCH3-211ENST00000466054 C2CD4DB7Z1M9 353 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 EPHB6O15197 1021 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 CDC123O75794 336 aaPredicted RBP3.78□□□□□ -1.8
LRCH3-211ENST00000466054 MOCS3O95396 460 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 IGLV1-44P01699 117 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 RAF1P04049 648 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 PDGFRAP16234 1089 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 CEBPBP17676 345 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 ADRA2CP18825 462 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 RGS7P49802 495 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 BMXP51813 675 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 MFAP3P55082 362 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 PMP22Q01453 160 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 TRAP1Q12931 704 aaKnown RBP3.78□□□□□ -1.8
LRCH3-211ENST00000466054 TUBB2AQ13885 445 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 SQLEQ14534 574 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 TWISTNBQ3B726 338 aaPredicted RBP3.78□□□□□ -1.8
LRCH3-211ENST00000466054 LACTB2Q53H82 288 aaPredicted RBP3.78□□□□□ -1.8
LRCH3-211ENST00000466054 UGT3A1Q6NUS8 523 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 TRAT1Q6PIZ9 186 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 PET117Q6UWS5 81 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 NOTCH2NLQ7Z3S9 236 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 ANKRD13CQ8N6S4 541 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 NKAIN3Q8N8D7 197 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 KBTBD8Q8NFY9 601 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 OR5AP2Q8NGF4 316 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 MRGPRDQ8TDS7 321 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 DEPDC1BQ8WUY9 529 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 INPP5KQ9BT40 448 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 TUBB2BQ9BVA1 445 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 SHARPINQ9H0F6 387 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 ACTL8Q9H568 366 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 CHKBQ9Y259 395 aa3.78□□□□□ -1.8
LRCH3-211ENST00000466054 ARHGEF37A1IGU5 675 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 MSGN1A6NI15 193 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 VTNP04004 478 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 GBAP04062 536 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 ZNF883P0CG24 379 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 DARSP14868 501 aaKnown RBP3.77□□□□□ -1.81
LRCH3-211ENST00000466054 EPORP19235 508 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 ALDH4A1P30038 563 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 MTCP1P56278 107 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 RBP5P82980 135 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 MYL7Q01449 175 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 GCNT1Q02742 428 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 CDO1Q16878 200 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 KRTAP13-3Q3SY46 172 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 SLC25A53Q5H9E4 307 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 SHEQ5VZ18 495 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 FAM91A1Q658Y4 838 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 SPATA21Q7Z572 469 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 SPATA19Q7Z5L4 167 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 AMIGO1Q86WK6 493 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 TMEM178AQ8NBL3 297 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 SEPT1Q8WYJ6 367 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 NSMAFQ92636 917 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 RAD54LQ92698 747 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 PGM2Q96G03 612 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 GMPPAQ96IJ6 420 aaPredicted RBP3.77□□□□□ -1.81
LRCH3-211ENST00000466054 C4orf45Q96LM5 186 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 ATAD3AQ9NVI7 634 aa3.77□□□□□ -1.81
LRCH3-211ENST00000466054 IL16Q14005 1332 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 A0A1W2PPW3 197 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 MEIOCA2RUB1 952 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 NR5A2O00482 541 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 DDHD2O94830 711 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 SPP1P10451 314 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 TCF4P15884 667 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 ZNF26P17031 533 aaPredicted RBP3.76□□□□□ -1.81
LRCH3-211ENST00000466054 LHCGRP22888 699 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 CD27P26842 260 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 PPARDQ03181 441 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 RASGEF1BQ0VAM2 473 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 BFSP1Q12934 665 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 LRRC73Q5JTD7 316 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 LYSMD4Q5XG99 296 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 NOTUMQ6P988 496 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 DCLRE1AQ6PJP8 1040 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 TMEM207Q6UWW9 146 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 NRARPQ7Z6K4 114 aa3.76□□□□□ -1.81
LRCH3-211ENST00000466054 PHLDB2Q86SQ0 1253 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms