RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 KRT6AP02538 564 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 KRT6BP04259 564 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 CA5AP35218 305 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 RPS5P46782 204 aaKnown RBP19.16■□□□□ 0.66
SDF4-205ENST00000465727 ZCCHC8Q6NZY4 707 aaKnown RBP19.16■□□□□ 0.66
SDF4-205ENST00000465727 DLK2Q6UY11 383 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 ZZZ3Q8IYH5 903 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 CHTF18Q8WVB6 975 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 LPPQ93052 612 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 ULK4Q96C45 1275 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 CHCHD6Q9BRQ6 235 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 TMEM246Q9BRR3 403 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 CINPQ9BW66 212 aaPredicted RBP19.16■□□□□ 0.66
SDF4-205ENST00000465727 DYRK4Q9NR20 520 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 ELOVL2Q9NXB9 296 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 STX7O15400 261 aaKnown RBP19.16■□□□□ 0.66
SDF4-205ENST00000465727 SEMA3DO95025 777 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 PRLP01236 227 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 CD72P21854 359 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 MAPK1P28482 360 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 HNF4AP41235 474 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 CDKN2CP42773 168 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 PIK3CGP48736 1102 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 IRF3Q14653 427 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 PAN2Q504Q3 1202 aaKnown RBP19.16■□□□□ 0.66
SDF4-205ENST00000465727 FAM209AQ5JX71 171 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 C10orf62Q5T681 223 aaPredicted RBP19.16■□□□□ 0.66
SDF4-205ENST00000465727 C19orf48Q6RUI8 117 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 NRARPQ7Z6K4 114 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 CIR1Q86X95 450 aaPredicted RBP19.16■□□□□ 0.66
SDF4-205ENST00000465727 SCN4BQ8IWT1 228 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 DEPDC4Q8N2C3 294 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 STX19Q8N4C7 294 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 DENND6BQ8NEG7 585 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 NELL1Q92832 810 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 TINF2Q9BSI4 451 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 WWOXQ9NZC7 414 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 PCDHGB3Q9Y5G1 929 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 MAU2Q9Y6X3 613 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 HMX3A6NHT5 357 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 SSX4O60224 188 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 GUCA1CO95843 209 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 GPX2P18283 190 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 TYMPP19971 482 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 CACNB2Q08289 660 aaPredicted RBP19.15■□□□□ 0.66
SDF4-205ENST00000465727 EFEMP1Q12805 493 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 VEZF1Q14119 521 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 C9orf131Q5VYM1 1079 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 NXNL2Q5VZ03 156 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 GPR153Q6NV75 609 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 VTCN1Q7Z7D3 282 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 CYP4Z2PQ8N1L4 340 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 MED30Q96HR3 178 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 HHIPQ96QV1 700 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 PHOX2BQ99453 314 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 EGFL8Q99944 293 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 ZBED2Q9BTP6 218 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 MAGEH1Q9H213 219 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 C17orf102A2RUQ5 167 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 IQCF5A8MTL0 148 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 KCNK5O95279 499 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 EPB42P16452 691 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 SLC14A1Q13336 389 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 CERS6Q6ZMG9 384 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 ZNF605Q86T29 641 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 ANKRD46Q86W74 232 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 TCAIMQ8N3R3 496 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 PSD4Q8NDX1 1056 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 ADGRE3Q9BY15 652 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 RNF167Q9H6Y7 350 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 CARD8Q9Y2G2 431 aa19.15■□□□□ 0.66
SDF4-205ENST00000465727 CLIC1O00299 241 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 KIAA0513O60268 411 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 DNTTP04053 509 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 YES1P07947 543 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 ACPPP15309 386 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 CR2P20023 1033 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 PRPH2P23942 346 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 HOXD9P28356 352 aaPredicted RBP19.14■□□□□ 0.65
SDF4-205ENST00000465727 CACNG1Q06432 222 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 IQCCQ4KMZ1 466 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 SGO1Q5FBB7 561 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 NEK5Q6P3R8 708 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 CD300LGQ6UXG3 332 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 KRT73Q86Y46 540 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 GPC2Q8N158 579 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 OR8H2Q8N162 312 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 LPCAT1Q8NF37 534 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 GDF15Q99988 308 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 SPATA9Q9BWV2 254 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 ACPTQ9BZG2 426 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 ASAH2Q9NR71 780 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 C14orf119Q9NWQ9 140 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 ST3GAL5Q9UNP4 418 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 DLGAP4Q9Y2H0 992 aa19.14■□□□□ 0.65
SDF4-205ENST00000465727 LOC730098B7Z3J9 87 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 M0QZ92 97 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 PTHP01270 115 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 VIPP01282 170 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 DUOXA1Q1HG43 343 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms