RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 FASTKQ14296 549 aaKnown RBP8.52□□□□□ -1.05
UBA3-208ENST00000465627 LSM12Q3MHD2 195 aaKnown RBP8.52□□□□□ -1.05
UBA3-208ENST00000465627 PEAR1Q5VY43 1037 aaPredicted RBP8.52□□□□□ -1.05
UBA3-208ENST00000465627 METTL21CQ5VZV1 264 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 PMS2CLQ68D20 193 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 LAYNQ6UX15 382 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 TRPM8Q7Z2W7 1104 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 YTHDF3Q7Z739 585 aaKnown RBP8.52□□□□□ -1.05
UBA3-208ENST00000465627 CLNKQ7Z7G1 428 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 THOC6Q86W42 341 aaKnown RBP8.52□□□□□ -1.05
UBA3-208ENST00000465627 PARGQ86W56 976 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 LONP2Q86WA8 852 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 LMNTD1Q8N9Z9 388 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 LINC01555Q8NAE3 123 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 AGR3Q8TD06 166 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 MAGEC3Q8TD91 643 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 ACTRT2Q8TDY3 377 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 USP7Q93009 1102 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 RAD51AP1Q96B01 352 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 KLHDC7BQ96G42 594 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 CAMK1GQ96NX5 476 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 CDK15Q96Q40 435 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 LRRC61Q9BV99 259 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 NUF2Q9BZD4 464 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 NMUR2Q9GZQ4 415 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 ATG10Q9H0Y0 220 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 WDR55Q9H6Y2 383 aaPredicted RBP8.52□□□□□ -1.05
UBA3-208ENST00000465627 MVB12BQ9H7P6 319 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 DNAJC11Q9NVH1 559 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 SPATA7Q9P0W8 599 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 CIDEBQ9UHD4 219 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 TRPS1Q9UHF7 1281 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 SH2B3Q9UQQ2 575 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 ASF1AQ9Y294 204 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 STK38LQ9Y2H1 464 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 RNF11Q9Y3C5 154 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 MGAQ8IWI9 3026 aa8.52□□□□□ -1.05
UBA3-208ENST00000465627 OR52A4PA6NMU1 304 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 NPIPB8E9PQR5 432 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 IFRD1O00458 451 aaPredicted RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 EBAG9O00559 213 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 FCHO1O14526 889 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 PIP5K1BO14986 540 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 SCAMP1O15126 338 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 ATXN7O15265 892 aaPredicted RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 UGDHO60701 494 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 KATNA1O75449 491 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 WDR47O94967 919 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 TNFP01375 233 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 CAPN1P07384 714 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 SERPINA6P08185 405 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 T-ENOLP0DO92 83 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 F3P13726 295 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 ITPKAP23677 461 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 MAP4P27816 1152 aaKnown RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 EPHA3P29320 983 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 PKLRP30613 574 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 HSD17B2P37059 387 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 HTR6P50406 440 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 TBPL1P62380 186 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 UBE2IP63279 158 aaKnown RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 IFT88Q13099 833 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 SIM2Q14190 667 aaPredicted RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 TBCCQ15814 346 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 PDCD2Q16342 344 aaPredicted RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 LACTB2Q53H82 288 aaPredicted RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 TCHHL1Q5QJ38 904 aaPredicted RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 IYDQ6PHW0 289 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 SLCO4C1Q6ZQN7 724 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 Q6ZSR9 355 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 TRIM46Q7Z4K8 759 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 MTDHQ86UE4 582 aaKnown RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 C17orf82Q86X59 251 aaPredicted RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 HID1Q8IV36 788 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 PHACTR4Q8IZ21 702 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 DCBLD1Q8N8Z6 715 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 PPFIBP2Q8ND30 876 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 OR2T11Q8NH01 316 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 TWIST2Q8WVJ9 160 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 GAB3Q8WWW8 586 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 SNX19Q92543 992 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 C19orf60Q96EN9 201 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 ZC3H10Q96K80 434 aaKnown RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 C12orf66Q96MD2 445 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 IL17FQ96PD4 163 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 CCDC106Q9BWC9 280 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 SLC29A3Q9BZD2 475 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 TRIT1Q9H3H1 467 aaKnown RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 KIR3DX1Q9H7L2 352 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 TCF7L2Q9NQB0 619 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 SAR1AQ9NR31 198 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 GPRC5BQ9NZH0 403 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 ICKQ9UPZ9 632 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 APOBEC2Q9Y235 224 aaKnown RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 TIMM22Q9Y584 194 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 PTGDR2Q9Y5Y4 395 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 CFAP20Q9Y6A4 193 aaKnown RBP8.51□□□□□ -1.05
UBA3-208ENST00000465627 ITPR2Q14571 2701 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 KNL1Q8NG31 2342 aa8.51□□□□□ -1.05
UBA3-208ENST00000465627 SNRNP200O75643 2136 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms