RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 PCYT1BQ9Y5K3 369 aaPredicted RBP21.03■□□□□ 0.96
PDLIM2-216ENST00000464275 GPR89AB7ZAQ6 455 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 ANHXE9PGG2 379 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 GPR89BP0CG08 455 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 FXNQ16595 210 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 INTS11Q5TA45 600 aaKnown RBP21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 NOXRED1Q6NXP6 359 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 B3GNT6Q6ZMB0 384 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 SLCO4C1Q6ZQN7 724 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 NECTIN4Q96NY8 510 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 OR52E6Q96RD3 313 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 LGR4Q9BXB1 951 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 PNPLA3Q9NST1 481 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 ZFR2Q9UPR6 939 aaKnown RBP21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 PRKAB1Q9Y478 270 aa21.02■□□□□ 0.96
PDLIM2-216ENST00000464275 LAMA3Q16787 3333 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 FCGR1AP12314 374 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 S100A3P33764 101 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 RPS21P63220 83 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 IRF4Q15306 451 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 KIAA1211LQ6NV74 962 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 PROSER1Q86XN7 944 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 LRRC56Q8IYG6 542 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 RNF175Q8N4F7 328 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 CANT1Q8WVQ1 401 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 NEIL2Q969S2 332 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 TESCQ96BS2 214 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 REPS1Q96D71 796 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 WDR34Q96EX3 536 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 MSLNLQ96KJ4 702 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 PRPF18Q99633 342 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 ANKRD60Q9BZ19 345 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 RBM38Q9H0Z9 239 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 MBNL1Q9NR56 388 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 FBXL12Q9NXK8 326 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 RUVBL1Q9Y265 456 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 KANSL1LA0AUZ9 987 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 KLHL33A6NCF5 533 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 NPPBP16860 134 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 IL10P22301 178 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 TRIM23P36406 574 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 LTBRP36941 435 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 TUBA4AP68366 448 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 NADK2Q4G0N4 442 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 TMEM196Q5HYL7 178 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 MFSD2AQ8NA29 543 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 TP53I13Q8NBR0 393 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 GANCQ8TET4 914 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 SETD7Q8WTS6 366 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 FAM131CQ96AQ9 280 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 RAD51AP1Q96B01 352 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 TSSK3Q96PN8 268 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 WDR26Q9H7D7 661 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 SLC23A2Q9UGH3 650 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 ASF1AQ9Y294 204 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 AP3M1Q9Y2T2 418 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 NEUROG3Q9Y4Z2 214 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 PCDHB3Q9Y5E6 796 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 C5orf42Q9H799 3197 aa21.01■□□□□ 0.95
PDLIM2-216ENST00000464275 DHRS12A0PJE2 317 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 KMOO15229 486 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 GPIP06744 558 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 KELP23276 732 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 PSMA4P25789 261 aaKnown RBP21■□□□□ 0.95
PDLIM2-216ENST00000464275 CTHP32929 405 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 DDX39BQ13838 428 aaKnown RBP21■□□□□ 0.95
PDLIM2-216ENST00000464275 MTX3Q5HYI7 312 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 KIAA1161Q6NSJ0 714 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 MED27Q6P2C8 311 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 TMPRSS11BQ86T26 416 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 PPWD1Q96BP3 646 aaKnown RBP21■□□□□ 0.95
PDLIM2-216ENST00000464275 MTERF1Q99551 399 aaKnown RBP21■□□□□ 0.95
PDLIM2-216ENST00000464275 C1QTNF2Q9BXJ5 285 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 RMND5AQ9H871 391 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 PHPT1Q9NRX4 125 aaPredicted RBP21■□□□□ 0.95
PDLIM2-216ENST00000464275 VAPAQ9P0L0 249 aa21■□□□□ 0.95
PDLIM2-216ENST00000464275 C7orf72A4D263 438 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 PLRG1O43660 514 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 DFNA5O60443 496 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 PRMT3O60678 531 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 MYO1DO94832 1006 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 H6PDO95479 791 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 DNTTP04053 509 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 TACR1P25103 407 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 PLIN5Q00G26 463 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 TAP2Q03519 686 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 SGCGQ13326 291 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 SELPLGQ14242 412 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 FGL2Q14314 439 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 TMEM259Q4ZIN3 620 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 C10orf62Q5T681 223 aaPredicted RBP20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 ATG9BQ674R7 924 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 RBM44Q6ZP01 1051 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 ZBTB49Q6ZSB9 765 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 MSANTD1Q6ZTZ1 278 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 DCUN1D3Q8IWE4 304 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 RIMKLAQ8IXN7 391 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 TDHQ8IZJ6 230 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 OR7G3Q8NG95 312 aa20.99■□□□□ 0.95
PDLIM2-216ENST00000464275 SH3GL1Q99961 368 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms