RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 ADAMTS17Q8TE56 1095 aa12.87□□□□□ -0.35
COMMD3-205ENST00000463688 PYROXD1Q8WU10 500 aa12.87□□□□□ -0.35
COMMD3-205ENST00000463688 COL26A1Q96A83 441 aa12.87□□□□□ -0.35
COMMD3-205ENST00000463688 FAM136AQ96C01 138 aa12.87□□□□□ -0.35
COMMD3-205ENST00000463688 TSPAN17Q96FV3 270 aa12.87□□□□□ -0.35
COMMD3-205ENST00000463688 PDLIM5Q96HC4 596 aaKnown RBP12.87□□□□□ -0.35
COMMD3-205ENST00000463688 CABS1Q96KC9 395 aa12.87□□□□□ -0.35
COMMD3-205ENST00000463688 ERP44Q9BS26 406 aa12.87□□□□□ -0.35
COMMD3-205ENST00000463688 ZNF71Q9NQZ8 489 aaPredicted RBP12.87□□□□□ -0.35
COMMD3-205ENST00000463688 C14orf105Q9NVL8 296 aa12.87□□□□□ -0.35
COMMD3-205ENST00000463688 ZNF282Q9UDV7 671 aaPredicted RBP12.87□□□□□ -0.35
COMMD3-205ENST00000463688 KCNE1BA0A087WTH5 132 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 KLF7O75840 302 aaPredicted RBP12.86□□□□□ -0.35
COMMD3-205ENST00000463688 CEACAM4O75871 244 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 EIF2S1P05198 315 aaKnown RBP12.86□□□□□ -0.35
COMMD3-205ENST00000463688 IL10P22301 178 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 CXCR2P25025 360 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 MCM3P25205 808 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 HNMTP50135 292 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 SOX8P57073 446 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 VSX2P58304 361 aaPredicted RBP12.86□□□□□ -0.35
COMMD3-205ENST00000463688 TEDDM1Q5T9Z0 273 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 ATP1A1-AS1Q5TC04 95 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 PRAMEF17Q5VTA0 474 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 ZNF549Q6P9A3 640 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 MRGPREQ86SM8 312 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 CPNE9Q8IYJ1 553 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 CAMKVQ8NCB2 501 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 SPATA4Q8NEY3 305 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 ZNF480Q8WV37 535 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 CFAP36Q96G28 342 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 PHF12Q96QT6 1004 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 KRT12Q99456 494 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 POPDC3Q9HBV1 291 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 MLXIPLQ9NP71 852 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 DHCR7Q9UBM7 475 aaKnown RBP12.86□□□□□ -0.35
COMMD3-205ENST00000463688 TAC3Q9UHF0 121 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 CDC23Q9UJX2 597 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 NOVA2Q9UNW9 492 aaKnown RBP12.86□□□□□ -0.35
COMMD3-205ENST00000463688 TP53TG5Q9Y2B4 290 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 TEX264Q9Y6I9 313 aa12.86□□□□□ -0.35
COMMD3-205ENST00000463688 A0A0J9YVX5 310 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 AGPSO00116 658 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 TTI1O43156 1089 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 AHSGP02765 367 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 CAPN1P07384 714 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 ICAM2P13598 275 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 IVDP26440 423 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 RPS18P62269 152 aaKnown RBP12.85□□□□□ -0.35
COMMD3-205ENST00000463688 MPP1Q00013 466 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 PDIA2Q13087 525 aaKnown RBP12.85□□□□□ -0.35
COMMD3-205ENST00000463688 IL10RAQ13651 578 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.85□□□□□ -0.35
COMMD3-205ENST00000463688 PRAMEF13Q5VWM6 474 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 DUPD1Q68J44 220 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 CYHR1Q6ZMK1 362 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 CCDC91Q7Z6B0 441 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 PTRH1Q86Y79 214 aaKnown RBP12.85□□□□□ -0.35
COMMD3-205ENST00000463688 MIEF2Q96C03 454 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 ACAT2Q9BWD1 397 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 CAPS2Q9BXY5 557 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 AKIRIN1Q9H9L7 192 aaPredicted RBP12.85□□□□□ -0.35
COMMD3-205ENST00000463688 MKKSQ9NPJ1 570 aaPredicted RBP12.85□□□□□ -0.35
COMMD3-205ENST00000463688 P4HTMQ9NXG6 502 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 ARL15Q9NXU5 204 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 CHMP2BQ9UQN3 213 aa12.85□□□□□ -0.35
COMMD3-205ENST00000463688 A0A1W2PPV9 198 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 URADA6NGE7 173 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 E7ESA3 106 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 H0YIG0 161 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 KIF2AO00139 706 aaPredicted RBP12.84□□□□□ -0.35
COMMD3-205ENST00000463688 FURINP09958 794 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 FBLP22087 321 aaKnown RBP12.84□□□□□ -0.35
COMMD3-205ENST00000463688 TLE1Q04724 770 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 CUL1Q13616 776 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 DSG2Q14126 1118 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 MYBPC3Q14896 1274 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 RBBP7Q16576 425 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 PRTGQ2VWP7 1150 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 DCAF10Q5QP82 559 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 HECTD2Q5U5R9 776 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 ZNF425Q6IV72 752 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 ADAMTSL2Q86TH1 951 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 PAQR7Q86WK9 346 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 EEF1AKMT1Q8WVE0 214 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 LINGO1Q96FE5 620 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 SLC29A3Q9BZD2 475 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 DRC3Q9H069 523 aa12.84□□□□□ -0.35
COMMD3-205ENST00000463688 CLK4Q9HAZ1 481 aaKnown RBP12.84□□□□□ -0.35
COMMD3-205ENST00000463688 RUVBL2Q9Y230 463 aaKnown RBP12.84□□□□□ -0.35
COMMD3-205ENST00000463688 USP27XA6NNY8 438 aa12.83□□□□□ -0.36
COMMD3-205ENST00000463688 H0YGG7 62 aa12.83□□□□□ -0.36
COMMD3-205ENST00000463688 CTSVO60911 334 aa12.83□□□□□ -0.36
COMMD3-205ENST00000463688 SLC35G6P0C7Q6 338 aa12.83□□□□□ -0.36
COMMD3-205ENST00000463688 GSTM2P28161 218 aa12.83□□□□□ -0.36
COMMD3-205ENST00000463688 GCGRP47871 477 aa12.83□□□□□ -0.36
COMMD3-205ENST00000463688 CCR8P51685 355 aa12.83□□□□□ -0.36
COMMD3-205ENST00000463688 ARF3P61204 181 aaPredicted RBP12.83□□□□□ -0.36
COMMD3-205ENST00000463688 POU4F1Q01851 419 aa12.83□□□□□ -0.36
COMMD3-205ENST00000463688 ATP1A4Q13733 1029 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms