RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 NPIPA5E9PKD4 350 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 PSMD3O43242 534 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 VPS26AO75436 327 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 TPM1P09493 284 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 PSMA3P25788 255 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 PSMB5P28074 263 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 EEF1DP29692 281 aaKnown RBP13.73□□□□□ -0.21
SMC1A-204ENST00000463684 SLC26A3P40879 764 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 ART1P52961 327 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 PRTGQ2VWP7 1150 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 KCTD11Q693B1 232 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 FBXO42Q6P3S6 717 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 TMEM205Q6UW68 189 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 RNF44Q7L0R7 432 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 KLHDC8BQ8IXV7 354 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 SKA2Q8WVK7 121 aaPredicted RBP13.73□□□□□ -0.21
SMC1A-204ENST00000463684 IMMP1LQ96LU5 166 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 FAM118BQ9BPY3 351 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 TSPAN10Q9H1Z9 355 aaPredicted RBP13.73□□□□□ -0.21
SMC1A-204ENST00000463684 KLHL1Q9NR64 748 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 COQ3Q9NZJ6 369 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 TTC7AQ9ULT0 858 aaPredicted RBP13.73□□□□□ -0.21
SMC1A-204ENST00000463684 NPIPA1Q9UND3 350 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 EFR3BQ9Y2G0 817 aa13.73□□□□□ -0.21
SMC1A-204ENST00000463684 IQCF5A8MTL0 148 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 H0YGG7 62 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 ASNA1O43681 348 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 SLCO2B1O94956 709 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 GAS8O95995 478 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 C8orf89P0DMQ9 161 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 CD46P15529 392 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 CMPK1P30085 196 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 HADHBP55084 474 aaKnown RBP13.72□□□□□ -0.21
SMC1A-204ENST00000463684 ARF3P61204 181 aaPredicted RBP13.72□□□□□ -0.21
SMC1A-204ENST00000463684 BTBD16Q32M84 506 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 CCDC38Q502W7 563 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 ACER2Q5QJU3 275 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 CAVIN1Q6NZI2 390 aaKnown RBP13.72□□□□□ -0.21
SMC1A-204ENST00000463684 AFTPHQ6ULP2 937 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 NCCRP1Q6ZVX7 275 aaPredicted RBP13.72□□□□□ -0.21
SMC1A-204ENST00000463684 FAM98AQ8NCA5 519 aaKnown RBP13.72□□□□□ -0.21
SMC1A-204ENST00000463684 OR2A1Q8NGT9 310 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 HMGCLL1Q8TB92 370 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 MAGEC3Q8TD91 643 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 AGAP11Q8TF27 550 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 PHF10Q8WUB8 498 aaKnown RBP13.72□□□□□ -0.21
SMC1A-204ENST00000463684 KRT35Q92764 455 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 HDAC10Q969S8 669 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 SDCCAG3Q96C92 435 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 MRFAP1L1Q96HT8 127 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 UTP23Q9BRU9 249 aaKnown RBP13.72□□□□□ -0.21
SMC1A-204ENST00000463684 DPH7Q9BTV6 452 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 ABHD10Q9NUJ1 306 aa13.72□□□□□ -0.21
SMC1A-204ENST00000463684 OR2A25A4D2G3 310 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 E9PLN8 166 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 PRRG2O14669 202 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 PJA2O43164 708 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 NRP2O60462 931 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 PHF2O75151 1096 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 C1orf105O95561 183 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 TSPAN12O95859 305 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 GOT2P00505 430 aaKnown RBP13.71□□□□□ -0.21
SMC1A-204ENST00000463684 CD99P14209 185 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 AOAHP28039 575 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 CCNFP41002 786 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 CETN2P41208 172 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 TUBA3CQ13748 450 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 FASTKD1Q53R41 847 aaKnown RBP13.71□□□□□ -0.21
SMC1A-204ENST00000463684 GARNL3Q5VVW2 1013 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 LRRC8BQ6P9F7 803 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 TUBA3EQ6PEY2 450 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 LINC00523Q86TU6 105 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 BEST3Q8N1M1 668 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 GHDCQ8N2G8 530 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 CSNK1A1LQ8N752 337 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 HORMAD2Q8N7B1 307 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 AMER3Q8N944 861 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 DNAAF3Q8N9W5 541 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 TMEM178AQ8NBL3 297 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 ACBD4Q8NC06 268 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 OR6P1Q8NGX9 317 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 OR4L1Q8NH43 312 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 RERGQ96A58 199 aaPredicted RBP13.71□□□□□ -0.21
SMC1A-204ENST00000463684 FOPNLQ96NB1 174 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 SIGLEC12Q96PQ1 595 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 VKORC1Q9BQB6 163 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 OSBPL8Q9BZF1 889 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 ANAPC5Q9UJX4 755 aa13.71□□□□□ -0.21
SMC1A-204ENST00000463684 RUVBL1Q9Y265 456 aaKnown RBP13.71□□□□□ -0.21
SMC1A-204ENST00000463684 FOXO6A8MYZ6 492 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 TXNDC9O14530 226 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 SEC24DO94855 1032 aaPredicted RBP13.7□□□□□ -0.22
SMC1A-204ENST00000463684 TJP3O95049 919 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 METTL18O95568 372 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 CD96P40200 585 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 OR1C1Q15619 314 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 MEP1AQ16819 746 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 SYT16Q17RD7 645 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 HKDC1Q2TB90 917 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 P3H1Q32P28 736 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms