RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 PCID2Q5JVF3 399 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 FBXO42Q6P3S6 717 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 DRICH1Q6PGQ1 229 aaPredicted RBP18.85■□□□□ 0.61
VARS-221ENST00000463184 ACTRT1Q8TDG2 376 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 HAS2Q92819 552 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 MOCOSQ96EN8 888 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 MAGEB10Q96LZ2 347 aaPredicted RBP18.85■□□□□ 0.61
VARS-221ENST00000463184 ZFYVE21Q9BQ24 234 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 MESP1Q9BRJ9 268 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 P2RY12Q9H244 342 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 CHRAC1Q9NRG0 131 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 HOMER3Q9NSC5 361 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 SPATA7Q9P0W8 599 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 MARCH4Q9P2E8 410 aaPredicted RBP18.85■□□□□ 0.61
VARS-221ENST00000463184 COPG2Q9UBF2 871 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 CDC14AQ9UNH5 594 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 ABCA12Q86UK0 2595 aa18.85■□□□□ 0.61
VARS-221ENST00000463184 A0A1W2PPV9 198 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 PRSS44E7EML9 344 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 PGRMC1O00264 195 aaKnown RBP18.84■□□□□ 0.61
VARS-221ENST00000463184 PCDH17O14917 1159 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 COX6A1P12074 109 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 PRF1P14222 555 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 CXCR2P25025 360 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 SOX11P35716 441 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 TNFSF10P50591 281 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 EMP2P54851 167 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 CCSMST1Q4G0I0 132 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 LAPTM4BQ86VI4 370 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 MPP5Q8N3R9 675 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 BRIX1Q8TDN6 353 aaKnown RBP18.84■□□□□ 0.61
VARS-221ENST00000463184 PSMF1Q92530 271 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 MS4A14Q96JA4 679 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 RAB6BQ9NRW1 208 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 PTGFRNQ9P2B2 879 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 ZNF148Q9UQR1 794 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 SAR1BQ9Y6B6 198 aa18.84■□□□□ 0.61
VARS-221ENST00000463184 A0A1W2PQ72 361 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 OR2A25A4D2G3 310 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 PRPF4O43172 522 aaKnown RBP eCLIP18.83■□□□□ 0.6
VARS-221ENST00000463184 NDUFS3O75489 264 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 BMP10O95393 424 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 SERPINA7P05543 415 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 APRTP07741 180 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 CMPK1P30085 196 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 CASQ1P31415 396 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 TDGF1P3P51864 188 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 PRTGQ2VWP7 1150 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 CNSTQ6PJW8 725 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 RIPOR1Q6ZS17 1223 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 NR4A3Q92570 626 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 MVB12AQ96EY5 273 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 CABS1Q96KC9 395 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 C10orf90Q96M02 699 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 TAAR6Q96RI8 345 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 DPH7Q9BTV6 452 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 UNKQ9C0B0 810 aaKnown RBP18.83■□□□□ 0.6
VARS-221ENST00000463184 PLA2G3Q9NZ20 509 aa18.83■□□□□ 0.6
VARS-221ENST00000463184 STOX2Q9P2F5 926 aaPredicted RBP18.83■□□□□ 0.6
VARS-221ENST00000463184 DRG1Q9Y295 367 aaKnown RBP18.83■□□□□ 0.6
VARS-221ENST00000463184 MRPS2Q9Y399 296 aaKnown RBP18.83■□□□□ 0.6
VARS-221ENST00000463184 IDSB3KWA1 339 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 H0YGG7 62 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 NRP2O60462 931 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 PHF2O75151 1096 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 VPS26AO75436 327 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 WFS1O76024 890 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 KCNK10P57789 538 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 ARF3P61204 181 aaPredicted RBP18.82■□□□□ 0.6
VARS-221ENST00000463184 ART3Q13508 389 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 SNX1Q13596 522 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 DSG2Q14126 1118 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 FASTKQ14296 549 aaKnown RBP18.82■□□□□ 0.6
VARS-221ENST00000463184 YIPF2Q9BWQ6 316 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 TREX1Q9NSU2 369 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 C14orf105Q9NVL8 296 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 RIC8BQ9NVN3 520 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 PAK5Q9P286 719 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 TRPC4Q9UBN4 977 aa18.82■□□□□ 0.6
VARS-221ENST00000463184 RUVBL2Q9Y230 463 aaKnown RBP18.82■□□□□ 0.6
VARS-221ENST00000463184 IGHV1-45A0A0A0MS14 117 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 KRT87PA6NCN2 255 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 FANCGO15287 622 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 MATN4O95460 622 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 ETS1P14921 441 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 EIF3BP55884 814 aaKnown RBP18.81■□□□□ 0.6
VARS-221ENST00000463184 AP2B1P63010 937 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 GFRALQ6UXV0 394 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 SYT10Q6XYQ8 523 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 MCEMP1Q8IX19 187 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 SIRT6Q8N6T7 355 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 PRELID2Q8N945 189 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 CCDC89Q8N998 374 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 PLCD4Q9BRC7 762 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 TGIF2Q9GZN2 237 aa18.81■□□□□ 0.6
VARS-221ENST00000463184 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.81■□□□□ 0.6
VARS-221ENST00000463184 MRPS30Q9NP92 439 aaKnown RBP18.81■□□□□ 0.6
VARS-221ENST00000463184 MKKSQ9NPJ1 570 aaPredicted RBP18.81■□□□□ 0.6
VARS-221ENST00000463184 KLF2Q9Y5W3 355 aaPredicted RBP18.81■□□□□ 0.6
VARS-221ENST00000463184 MYO7BQ6PIF6 2116 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms