RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	TTC29	Q8NA56	475 aa	Predicted RBP	9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	SLC38A9	Q8NBW4	561 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	ATL1	Q8WXF7	558 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	ZUFSP	Q96AP4	578 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	PYCR2	Q96C36	320 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	PRAP1	Q96NZ9	151 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	RUFY1	Q96T51	708 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	MCMBP	Q9BTE3	642 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	EFHD1	Q9BUP0	239 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	CHST8	Q9H2A9	424 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	PRORY	Q9H606	182 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	L2HGDH	Q9H9P8	463 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	POPDC3	Q9HBV1	291 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	LHX9	Q9NQ69	397 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	CUEDC1	Q9NWM3	386 aa	Predicted RBP	9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	CD274	Q9NZQ7	290 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	DHCR7	Q9UBM7	475 aa	Known RBP	9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	GPN3	Q9UHW5	284 aa	Predicted RBP	9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	TLK1	Q9UKI8	766 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	PCDHB3	Q9Y5E6	796 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	AP1M2	Q9Y6Q5	423 aa		9.22	□□□□□ -0.93
PSMD4-208	ENST00000462970	LOC105369274	A0A096LPK9	316 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	LOC102723532	A0A0G2JNH3	316 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	EXOC1L	A0A1B0GW35	172 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	CDC14C	A4D256	554 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	ZNF891	A8MT65	544 aa	Predicted RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	TARM1	B6A8C7	271 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970		C9J4A7	227 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970		K7ENP7	123 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	MEN1	O00255	615 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	HAT1	O14929	419 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	NKX2-8	O15522	239 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	ZNF500	O60304	480 aa	Predicted RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	ANXA5	P08758	320 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	CDH1	P12830	882 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	AGXT	P21549	392 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	CRABP2	P29373	138 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	GABRA4	P48169	554 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	SERPINB8	P50452	374 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	PMS2	P54278	862 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	RPS18	P62269	152 aa	Known RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	ABAT	P80404	500 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	PRDX1	Q06830	199 aa	Known RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	ERV3-1	Q14264	604 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	C18orf21	Q32NC0	220 aa	Predicted RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	TAF1B	Q53T94	588 aa	Predicted RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	ATP1A1-AS1	Q5TC04	95 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	MLIP	Q5VWP3	458 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	LCN10	Q6JVE6	187 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	TLDC1	Q6P9B6	456 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	INO80C	Q6PI98	192 aa	Predicted RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	SBSN	Q6UWP8	590 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	TTLL10	Q6ZVT0	673 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	ADAMTSL2	Q86TH1	951 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	PAQR7	Q86WK9	346 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	GPSM1	Q86YR5	675 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	RELL1	Q8IUW5	271 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	OR4N4	Q8N0Y3	316 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	METTL27	Q8N6F8	245 aa	Predicted RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	KCTD4	Q8WVF5	259 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	STARD8	Q92502	1023 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	RERG	Q96A58	199 aa	Predicted RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	FBXL8	Q96CD0	374 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	PDLIM5	Q96HC4	596 aa	Known RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	TSNARE1	Q96NA8	513 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	BBC3	Q96PG8	261 aa	Predicted RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	PAFAH2	Q99487	392 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	ZFYVE21	Q9BQ24	234 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	PLCD4	Q9BRC7	762 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	ARHGAP9	Q9BRR9	750 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	DERL2	Q9GZP9	239 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	TWSG1	Q9GZX9	223 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	PCBD2	Q9H0N5	130 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	VPS11	Q9H270	941 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	ALG9	Q9H6U8	611 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	SNX15	Q9NRS6	342 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	PCMTD2	Q9NV79	361 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	WWOX	Q9NZC7	414 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	RNF112	Q9ULX5	631 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	SRPK3	Q9UPE1	567 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	SH2B3	Q9UQQ2	575 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	DYRK1B	Q9Y463	629 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	OARD1	Q9Y530	152 aa		9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970		V9GYY5	206 aa	Predicted RBP	9.21	□□□□□ -0.94
PSMD4-208	ENST00000462970	ATRX	P46100	2492 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	IGKV1-8	A0A0C4DH67	115 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	OR2A25	A4D2G3	310 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	SUPT3H	B4E1H0	165 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970		H0YGG7	62 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	SUPT3H	O75486	399 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	WDR47	O94967	919 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	SERPIND1	P05546	499 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	LTA4H	P09960	611 aa	Known RBP	9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	MSL3P1	P0C860	447 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	SLC35E2B	P0CK96	405 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	CD1D	P15813	335 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	TFEB	P19484	476 aa		9.2	□□□□□ -0.94
PSMD4-208	ENST00000462970	F8A1	P23610	371 aa		9.2	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms