RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	ABI3	Q9P2A4	366 aa		10.61	□□□□□ -0.71
PTPN7-204	ENST00000462815	AMFR	Q9UKV5	643 aa		10.61	□□□□□ -0.71
PTPN7-204	ENST00000462815	SLC39A10	Q9ULF5	831 aa		10.61	□□□□□ -0.71
PTPN7-204	ENST00000462815	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.61	□□□□□ -0.71
PTPN7-204	ENST00000462815	RUVBL1	Q9Y265	456 aa	Known RBP	10.61	□□□□□ -0.71
PTPN7-204	ENST00000462815	FAM169A	Q9Y6X4	670 aa		10.61	□□□□□ -0.71
PTPN7-204	ENST00000462815	NSG1	A0A0A6YYJ2	146 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	TRAV17	A0A0B4J275	112 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	ARHGEF33	A8MVX0	844 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	MIF4GD	A9UHW6	222 aa	Known RBP	10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815		F8W8V4	182 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	MYO1C	O00159	1063 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	CD3EAP	O15446	510 aa	Known RBP	10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	P2RX6	O15547	441 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	BMP10	O95393	424 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	WDPCP	O95876	746 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	ITGAM	P11215	1152 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	FBL	P22087	321 aa	Known RBP	10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	ATP5D	P30049	168 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	STIP1	P31948	543 aa	Known RBP	10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	CA7	P43166	264 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	TTPA	P49638	278 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	PRAME	P78395	509 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	ARG2	P78540	354 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	CRADD	P78560	199 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	OCA2	Q04671	838 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	EEF1A2	Q05639	463 aa	Known RBP	10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	TMED2	Q15363	201 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	SIX1	Q15475	284 aa	Predicted RBP	10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	MUM1	Q2TAK8	710 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	AARS2	Q5JTZ9	985 aa	Known RBP	10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	RIPOR1	Q6ZS17	1223 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	PEX26	Q7Z412	305 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	SPNS2	Q8IVW8	549 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	ZC3H7A	Q8IWR0	971 aa	Known RBP	10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	LPGAT1	Q92604	370 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	MVB12A	Q96EY5	273 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	VPS50	Q96JG6	964 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	PDLIM2	Q96JY6	352 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	IMMP1L	Q96LU5	166 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	TTC1	Q99614	292 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	PLCD4	Q9BRC7	762 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	DPH7	Q9BTV6	452 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	TRIM8	Q9BZR9	551 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	ZNF700	Q9H0M5	742 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	GALP	Q9UBC7	116 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	GNPTG	Q9UJJ9	305 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	CAPN6	Q9Y6Q1	641 aa		10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	NCOA6	Q14686	2063 aa	Predicted RBP	10.6	□□□□□ -0.71
PTPN7-204	ENST00000462815	PSIP1	O75475	530 aa	Known RBP	10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	F10	P00742	488 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	EIF2S1	P05198	315 aa	Known RBP	10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	ZSCAN5DP	P0CG00	497 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	NMBR	P28336	390 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	CCNF	P41002	786 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	EMP2	P54851	167 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	NAP1L1	P55209	391 aa	Known RBP	10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	ADORA2A-AS1	P86434	159 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	CDSN	Q15517	529 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	SYT16	Q17RD7	645 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	ZNF630	Q2M218	657 aa	Predicted RBP	10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	TYSND1	Q2T9J0	566 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	PCID2	Q5JVF3	399 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	PTRHD1	Q6GMV3	140 aa	Known RBP	10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	CNST	Q6PJW8	725 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	PPP1R21	Q6ZMI0	780 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	LRRC6	Q86X45	466 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	LRRC56	Q8IYG6	542 aa	Predicted RBP	10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	MPP5	Q8N3R9	675 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	UBL4B	Q8N7F7	174 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	PANX3	Q96QZ0	392 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	RAB6B	Q9NRW1	208 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	C14orf105	Q9NVL8	296 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	RIC8B	Q9NVN3	520 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	F8	P00451	2351 aa		10.59	□□□□□ -0.71
PTPN7-204	ENST00000462815	DYTN	A2CJ06	578 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	PHF2	O75151	1096 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	NIPSNAP2	O75323	286 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	UNC5C	O95185	931 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	APRT	P07741	180 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	RPL22	P35268	128 aa	Known RBP	10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	PTGER4	P35408	488 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	PPARG	P37231	505 aa	Predicted RBP	10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	ADAR	P55265	1226 aa	Known RBP	10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	PMP22	Q01453	160 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	RELA	Q04206	551 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	GARNL3	Q5VVW2	1013 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	H3F3C	Q6NXT2	135 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	SUSD1	Q6UWL2	747 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	GFRAL	Q6UXV0	394 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	OTOA	Q7RTW8	1153 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	ZNF295-AS1	Q8N0V1	137 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	CSNK1A1L	Q8N752	337 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	PPHLN1	Q8NEY8	458 aa	Known RBP	10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	OR9A1P	Q8NGU1	263 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	DNAJB8	Q8NHS0	232 aa		10.58	□□□□□ -0.72
PTPN7-204	ENST00000462815	C1orf54	Q8WWF1	131 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms