RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SPANXN3Q5MJ09 141 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 MLIPQ5VWP3 458 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 DUPD1Q68J44 220 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 PTRHD1Q6GMV3 140 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 TRMT10BQ6PF06 316 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 CNSTQ6PJW8 725 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 UNC5AQ6ZN44 842 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 COX15Q7KZN9 410 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 KCNMB4Q86W47 210 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 CNTN4Q8IWV2 1026 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 TBC1D21Q8IYX1 336 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 GPR135Q8IZ08 494 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 LMNTD1Q8N9Z9 388 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 CLEC1AQ8NC01 280 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 C2CD4AQ8NCU7 369 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 ST6GALNAC3Q8NDV1 305 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 ASZ1Q8WWH4 475 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 FAM136AQ96C01 138 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 FER1L6-AS2Q96M78 137 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 IP6K3Q96PC2 410 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 PANX3Q96QZ0 392 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 TSSK1BQ9BXA7 367 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 ILKAPQ9H0C8 392 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 IARS2Q9NSE4 1012 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 C20orf96Q9NUD7 363 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 FBXO5Q9UKT4 447 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 PLAGL1Q9UM63 463 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 NOVA2Q9UNW9 492 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 RUVBL2Q9Y230 463 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 ASF1AQ9Y294 204 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 SNX24Q9Y343 169 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 NFS1Q9Y697 457 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 MED13LQ71F56 2210 aa7.6□□□□□ -1.19
CDC42BPA-210ENST00000462553 A0A0J9YY10 115 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 F8W8V4 182 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 H3BMM5 538 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 SMAPO00193 183 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 SOCS6O14544 535 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 TTC4O95801 387 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 ALPPP05187 535 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 APOA4P06727 396 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 ERVK-10P10266 1014 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 PRF1P14222 555 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 ATP5DP30049 168 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 SHMT2P34897 504 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 BDKRB1P46663 353 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 DCDP81605 110 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 GTF3C1Q12789 2109 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 THOC5Q13769 683 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 FRG1Q14331 258 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 TMED2Q15363 201 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 TRADDQ15628 312 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 CCSMST1Q4G0I0 132 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 ACSBG2Q5FVE4 666 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 HP1BP3Q5SSJ5 553 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 RBM20Q5T481 1227 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 ZNF449Q6P9G9 518 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 IGFL2Q6UWQ7 119 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 UNC5DQ6UXZ4 953 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 SDCCAG8Q86SQ7 713 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 ANKMY2Q8IV38 441 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 DCUN1D3Q8IWE4 304 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 FAM20CQ8IXL6 584 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 DNAJC22Q8N4W6 341 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 ZNF655Q8N720 491 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 LINC01555Q8NAE3 123 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 CD200R1Q8TD46 325 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 DENND1AQ8TEH3 1009 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 PPP4R1Q8TF05 950 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 LRRC39Q96DD0 335 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 CERS2Q96G23 380 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 CFAP36Q96G28 342 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 IL17FQ96PD4 163 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 SPSB2Q99619 263 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 WDR77Q9BQA1 342 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 C17orf62Q9BQA9 187 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 MESP1Q9BRJ9 268 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 ERP44Q9BS26 406 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 FAM167BQ9BTA0 163 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 AARSD1Q9BTE6 412 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 SLC7A5P2Q9GIP4 190 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 DPH5Q9H2P9 285 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 SLC6A20Q9NP91 592 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 WHRNQ9P202 907 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 NDOR1Q9UHB4 597 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 CIDEBQ9UHD4 219 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 CDC23Q9UJX2 597 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 FBXL4Q9UKA2 621 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 SRPK3Q9UPE1 567 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 TDRKHQ9Y2W6 561 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 COPG1Q9Y678 874 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 AP1M2Q9Y6Q5 423 aa7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 ZNF469Q96JG9 3925 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-210ENST00000462553 ARHGEF33A8MVX0 844 aa7.58□□□□□ -1.2
CDC42BPA-210ENST00000462553 AGPSO00116 658 aa7.58□□□□□ -1.2
CDC42BPA-210ENST00000462553 PEX12O00623 359 aa7.58□□□□□ -1.2
CDC42BPA-210ENST00000462553 PRICKLE3O43900 615 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-210ENST00000462553 IPO13O94829 963 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-210ENST00000462553 HAUS5O94927 633 aa7.58□□□□□ -1.2
CDC42BPA-210ENST00000462553 MATN4O95460 622 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms