RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ARF4P18085 180 aaPredicted RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 CBLP22681 906 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 PRPHP41219 470 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 IER3P46695 156 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 SMSP52788 366 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 ARFIP1P53367 373 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 BRWD1-AS2P59051 145 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 AKAP17AQ02040 695 aaKnown RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 TRIM29Q14134 588 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 GAMTQ14353 236 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 CA9Q16790 459 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 TMEM35AQ53FP2 167 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 ELFN2Q5R3F8 820 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 NDUFAF5Q5TEU4 345 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 LRRC38Q5VT99 294 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 KCTD11Q693B1 232 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 C11orf63Q6NUN7 778 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 ARMC9Q7Z3E5 817 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 PRSS42Q7Z5A4 293 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 ZNF410Q86VK4 478 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 FJX1Q86VR8 437 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 PTOV1Q86YD1 416 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 RNF113BQ8IZP6 322 aaKnown RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 CRYBG2Q8N1P7 616 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 KDM8Q8N371 416 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 PGBD5Q8N414 524 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 NRACQ8N912 160 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 RASGEF1AQ8N9B8 481 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 L3MBTL4Q8NA19 623 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 NPEPL1Q8NDH3 523 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 OR13J1Q8NGT2 312 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 TMEM255BQ8WV15 326 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 FRAT1Q92837 279 aaPredicted RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 ABTB1Q969K4 478 aaPredicted RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 CDKN2AIPNLQ96HQ2 116 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 ZNF560Q96MR9 790 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 CRACR2AQ9BSW2 395 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 RBM38Q9H0Z9 239 aaKnown RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 S1PR5Q9H228 398 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 TRPC7Q9HCX4 862 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 TCP11L1Q9NUJ3 509 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 KCNS2Q9ULS6 477 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 CUL7Q14999 1698 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 CC2D2AQ9P2K1 1620 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 SAMD9Q5K651 1589 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 CFTRP13569 1480 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 TCOF1Q13428 1488 aaKnown RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 RPRD2Q5VT52 1461 aaKnown RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 CARMIL1Q5VZK9 1371 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 PDS5AQ29RF7 1337 aaKnown RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 TEX13DA0A0J9YY54 714 aaPredicted RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 A0A0U1RQJ8 604 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 C5orf60A6NFR6 353 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 OR6C75A6NL08 312 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 KPNA7A9QM74 516 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 PRSS46E5RG02 174 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 H3BNX3 289 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 MID1O15344 667 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 BUD23O43709 281 aaKnown RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 WDR1O75083 606 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 RPS6KA5O75582 802 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 ATP6AP2O75787 350 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 CLDN14O95500 239 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 NTN1O95631 604 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 PDGFBP01127 241 aaPredicted RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 TGFAP01135 160 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 IRF2P14316 349 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 CSF2RAP15509 400 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 ITGA2P17301 1181 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 CKMT2P17540 419 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 PIK3R1P27986 724 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 SFNP31947 248 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 GNL1P36915 607 aaPredicted RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 MNDAP41218 407 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 CDX1P47902 265 aaPredicted RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 FOXG1P55316 489 aaPredicted RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 CLDN15P56746 228 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 GALK2Q01415 458 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 BNC1Q01954 994 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 ROR2Q01974 943 aaKnown RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 DMPKQ09013 629 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 ILF2Q12905 390 aaKnown RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 ZNF234Q14588 700 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 TRADDQ15628 312 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 UGP2Q16851 508 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 PHLDA2Q53GA4 152 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 FAM46CQ5VWP2 391 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 SUSD4Q5VX71 490 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 OR7E24Q6IFN5 339 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 PLXDC2Q6UX71 529 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 RBM43Q6ZSC3 357 aaKnown RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 EXOC3L1Q86VI1 746 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 AMIGO1Q86WK6 493 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 MMD2Q8IY49 270 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 ELMOD2Q8IZ81 293 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 FBXW8Q8N3Y1 598 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 CPSF7Q8N684 471 aaKnown RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 PRR26Q8N8Z3 221 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 GMCL1P1Q8NEA9 526 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 OR4K1Q8NGD4 311 aa2.78□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms