RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 C9orf43Q8TAL5 461 aaPredicted RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 SLC28A3Q9HAS3 691 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 MTRRQ9UBK8 725 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 NWD2Q9ULI1 1742 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 SSNA1O43805 119 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 DIRAS1O95057 198 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 RB1P06400 928 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 AZGP1P25311 298 aaKnown RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 HTR1EP28566 365 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 SCN1BQ07699 218 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF155Q12901 538 aaPredicted RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF423Q2M1K9 1284 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 BLOC1S3Q6QNY0 202 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 RANBP3LQ86VV4 465 aaPredicted RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 MMAAQ8IVH4 418 aaKnown RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 NPAS3Q8IXF0 933 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 ZCCHC10Q8TBK6 192 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 C12orf43Q96C57 262 aaKnown RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 HSH2DQ96JZ2 352 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 TRIM8Q9BZR9 551 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 CTPS2Q9NRF8 586 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 TMEM9Q9P0T7 183 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 ZBTB42B2RXF5 422 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 M0QZQ0 153 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ADH5P11766 374 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 IL7RP16871 459 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 HNF1BP35680 557 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 NCBP2P52298 156 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTPRU-205ENST00000460170 GALNT1Q10472 559 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-205ENST00000460170 IL18Q14116 193 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ATP6AP1Q15904 470 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 PIGGQ5H8A4 983 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 FAM91A1Q658Y4 838 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF773Q6PK81 442 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 MRPL10Q7Z7H8 261 aaKnown RBP14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-205ENST00000460170 HDDC3Q8N4P3 179 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF248Q8NDW4 579 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 KLK6Q92876 244 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 POLR2J2Q9GZM3 115 aaKnown RBP14.36□□□□□ -0.11
PTPRU-205ENST00000460170 WDR26Q9H7D7 661 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 SMURF2Q9HAU4 748 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 KCNK13Q9HB14 408 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 WNT6Q9Y6F9 365 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 DDX60Q8IY21 1712 aaKnown RBP14.36□□□□□ -0.11
PTPRU-205ENST00000460170 RIIAD1A6NNX1 92 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 LEFTY2O00292 366 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 SCAMP1O15126 338 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 STC2O76061 302 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 TAF13Q15543 124 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 OR4D1Q15615 310 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 MEP1AQ16819 746 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF311Q5JNZ3 666 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 PLEKHS1Q5SXH7 462 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 FAM171BQ6P995 826 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 TRPV1Q8NER1 839 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ZFAND2BQ8WV99 257 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 RGMAQ96B86 450 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 PHF12Q96QT6 1004 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 INSL6Q9Y581 213 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 TRBC2A0A5B9 178 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 SCN2BO60939 215 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 LINGO3P0C6S8 592 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ACP5P13686 325 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ITPKBP27987 946 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 TAZQ16635 292 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 KLHL22Q53GT1 634 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 OGFRL1Q5TC84 451 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-205ENST00000460170 KAT2AQ92830 837 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 RDH12Q96NR8 316 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 LIN28AQ9H9Z2 209 aaKnown RBP14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ING3Q9NXR8 418 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 OAS3Q9Y6K5 1087 aaKnown RBP14.36□□□□□ -0.11
PTPRU-205ENST00000460170 GRID2O43424 1007 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 CPN2P22792 545 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 TIE1P35590 1138 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 SH3BP2P78314 561 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 BICRALQ6AI39 1079 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 FAM110BQ8TC76 370 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 HERVK_113Q902F9 699 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 SRMSQ9H3Y6 488 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ELAC1Q9H777 363 aaKnown RBP14.36□□□□□ -0.11
PTPRU-205ENST00000460170 TM9SF3Q9HD45 589 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 OARD1Q9Y530 152 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ITGB4P16144 1822 aa14.36□□□□□ -0.11
PTPRU-205ENST00000460170 ABCB7O75027 752 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 PDGFRLQ15198 375 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 ALG11Q2TAA5 492 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 MARCH8Q5T0T0 291 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 CXorf57Q6NSI4 855 aaKnown RBP14.35□□□□□ -0.11
PTPRU-205ENST00000460170 LRRTM4Q86VH4 590 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 SMPDL3AQ92484 453 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 TFGQ92734 400 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-205ENST00000460170 CAMK1GQ96NX5 476 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 ING4Q9UNL4 249 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 PLCH1Q4KWH8 1693 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 DFNA5O60443 496 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 MPIP34949 423 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 CARTPTQ16568 116 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 CMPK2Q5EBM0 449 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms