RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 OTX2P32243 289 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 IL2P60568 153 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 MGAT5Q09328 741 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 KLRB1Q12918 225 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 CALCOCO2Q13137 446 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 PDAP1Q13442 181 aaKnown RBP15.41■□□□□ 0.06
COL7A1-203ENST00000459756 ATP1A4Q13733 1029 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 THEMIS2Q5TEJ8 643 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 HECTD2Q5U5R9 776 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 ZNF425Q6IV72 752 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 FAM45BPQ6NSW5 357 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 OVCH1Q7RTY7 1134 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 MRGPREQ86SM8 312 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 PAQR7Q86WK9 346 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 LRRC56Q8IYG6 542 aaPredicted RBP15.41■□□□□ 0.06
COL7A1-203ENST00000459756 OR4N4Q8N0Y3 316 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 GPATCH11Q8N954 259 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 FBXO36Q8NEA4 188 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 FAM45AQ8TCE6 357 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 LINGO1Q96FE5 620 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 SLC26A1Q9H2B4 701 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 PARVBQ9HBI1 364 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 WHRNQ9P202 907 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 ZFATQ9P243 1243 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 ADAMTS6Q9UKP5 1117 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 PDE10AQ9Y233 779 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 VWA7Q9Y334 891 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 HEATR5BQ9P2D3 2071 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 CCDC88CQ9P219 2028 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 H0YGG7 62 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 K7EM74 188 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 PEX12O00623 359 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 CNOT3O75175 753 aaKnown RBP15.4■□□□□ 0.06
COL7A1-203ENST00000459756 CEACAM4O75871 244 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 URI1O94763 535 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-203ENST00000459756 IGHEP01854 428 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 EIF2S1P05198 315 aaKnown RBP15.4■□□□□ 0.06
COL7A1-203ENST00000459756 FDXRP22570 491 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 HRH2P25021 359 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 CASRP41180 1078 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 CCL11P51671 97 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 PGDP52209 483 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 EMP3P54852 163 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 ARF3P61204 181 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-203ENST00000459756 FASTKD3Q14CZ7 662 aaKnown RBP15.4■□□□□ 0.06
COL7A1-203ENST00000459756 PRMT9Q6P2P2 845 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 ZBED8Q8IZ13 594 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 NACC2Q96BF6 587 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 SLC25A23Q9BV35 468 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 PCBD2Q9H0N5 130 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 MLXIPLQ9NP71 852 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 CCDC177Q9NQR7 707 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-203ENST00000459756 MOCS1Q9NZB8 636 aa15.4■□□□□ 0.06
COL7A1-203ENST00000459756 STOX2Q9P2F5 926 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-203ENST00000459756 G3BP2Q9UN86 482 aaKnown RBP15.4■□□□□ 0.06
COL7A1-203ENST00000459756 MED13Q9UHV7 2174 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 ANKRD12Q6UB98 2062 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 RAD51CO43502 376 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 TSPAN12O95859 305 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 UMODP07911 640 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 HIST1H2AGP0C0S8 130 aaPredicted RBP15.39■□□□□ 0.05
COL7A1-203ENST00000459756 NR1D1P20393 614 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 HIST1H2ADP20671 130 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 TBPL1P62380 186 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 MRPS25P82663 173 aaKnown RBP15.39■□□□□ 0.05
COL7A1-203ENST00000459756 C2orf54Q08AI8 447 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 ILF2Q12905 390 aaKnown RBP15.39■□□□□ 0.05
COL7A1-203ENST00000459756 MUM1Q2TAK8 710 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 PRTGQ2VWP7 1150 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 COX15Q7KZN9 410 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 ADCK2Q7Z695 626 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 SLC26A11Q86WA9 606 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 CSNK1A1LQ8N752 337 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 TEX19Q8NA77 164 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 RERGQ96A58 199 aaPredicted RBP15.39■□□□□ 0.05
COL7A1-203ENST00000459756 HIST1H2AHQ96KK5 128 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 FER1L6-AS2Q96M78 137 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 OR2A5Q96R48 311 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 HIST1H2AJQ99878 128 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 H2AFJQ9BTM1 129 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 DPH5Q9H2P9 285 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 ABCF3Q9NUQ8 709 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 NSMCE4AQ9NXX6 385 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 NXT1Q9UKK6 140 aaKnown RBP15.39■□□□□ 0.05
COL7A1-203ENST00000459756 PCDHGB7Q9Y5F8 929 aa15.39■□□□□ 0.05
COL7A1-203ENST00000459756 PABPN1LA6NDY0 278 aaKnown RBP15.38■□□□□ 0.05
COL7A1-203ENST00000459756 TXNDC9O14530 226 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 EIF3HO15372 352 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL7A1-203ENST00000459756 WISP1O95388 367 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 MED26O95402 600 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 PDGFAP04085 211 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 CCND1P24385 295 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 OR1D4P47884 311 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 CSRP3P50461 194 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 AP1S2P56377 157 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 TLE1Q04724 770 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 NKG7Q16617 165 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 PHKG1Q16816 387 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 PRAMEF13Q5VWM6 474 aa15.38■□□□□ 0.05
COL7A1-203ENST00000459756 DUPD1Q68J44 220 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms