RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 POLR3HQ9Y535 204 aaPredicted RBP23.56■■□□□ 1.36
U2AF1-204ENST00000459639 GSC2O15499 205 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 SNRPB2P08579 225 aaKnown RBP23.55■■□□□ 1.36
U2AF1-204ENST00000459639 CDH1P12830 882 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 SHMT2P34897 504 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 STX5Q13190 355 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 ZNF542PQ5EBM4 170 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 C1orf216Q8TAB5 229 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 DNASE2BQ8WZ79 361 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 UBE2E3Q969T4 207 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 CMTM7Q96FZ5 175 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 ACAT2Q9BWD1 397 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 MIR1-1HGQ9H1L0 117 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 XKR8Q9H6D3 395 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 EIF3LQ9Y262 564 aaKnown RBP23.55■■□□□ 1.36
U2AF1-204ENST00000459639 TSC22D4Q9Y3Q8 395 aa23.55■■□□□ 1.36
U2AF1-204ENST00000459639 OR5K4A6NMS3 321 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 TLR4O00206 839 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 SEC22BO75396 215 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 SLC19A1P41440 591 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 IL23RQ5VWK5 629 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 IYDQ6PHW0 289 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 LONP2Q86WA8 852 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 FUNDC1Q8IVP5 155 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 ABCA7Q8IZY2 2146 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 UTP4Q969X6 686 aaKnown RBP23.54■■□□□ 1.36
U2AF1-204ENST00000459639 NECAB3Q96P71 396 aaPredicted RBP23.54■■□□□ 1.36
U2AF1-204ENST00000459639 TMED5Q9Y3A6 229 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 PCDHB11Q9Y5F2 797 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 COL6A3P12111 3177 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 PRAMEF33A0A0G2JMD5 474 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 NME1P15531 152 aaKnown RBP23.54■■□□□ 1.36
U2AF1-204ENST00000459639 JUNDP17535 347 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 KIAA0040Q15053 153 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 LAYNQ6UX15 382 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 TAF8Q7Z7C8 310 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 FAM129CQ86XR2 697 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 TMEFF1Q8IYR6 380 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 KRT78Q8N1N4 520 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 ARHGAP24Q8N264 748 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 ABHD11Q8NFV4 315 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 ZFPM2Q8WW38 1151 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 MCUR1Q96AQ8 359 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 RCN3Q96D15 328 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 EFCAB1Q9HAE3 211 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 OR6C2Q9NZP2 312 aa23.54■■□□□ 1.36
U2AF1-204ENST00000459639 THADAQ6YHU6 1953 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 KIR2DS5A0A0G2JLQ3 304 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 A0A0G2JNG1 304 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 KIR2DS3K7RE56 304 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 CSF2P04141 144 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 PCNAP12004 261 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 ACPPP15309 386 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 XRCC1P18887 633 aaPredicted RBP23.53■■□□□ 1.36
U2AF1-204ENST00000459639 PSMB5P28074 263 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 NME5P56597 212 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 KIR2DS5Q14953 304 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 WDR45BQ5MNZ6 344 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 CACHD1Q5VU97 1274 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 ICE2Q659A1 982 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 CYP20A1Q6UW02 462 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 HUS1BQ8NHY5 278 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 TSPEARQ8WU66 669 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 METTL2AQ96IZ6 378 aaKnown RBP23.53■■□□□ 1.36
U2AF1-204ENST00000459639 MTERF1Q99551 399 aaKnown RBP23.53■■□□□ 1.36
U2AF1-204ENST00000459639 LRRC61Q9BV99 259 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 PITHD1Q9GZP4 211 aaPredicted RBP23.53■■□□□ 1.36
U2AF1-204ENST00000459639 POT1Q9NUX5 634 aa23.53■■□□□ 1.36
U2AF1-204ENST00000459639 TDRD6O60522 2096 aaKnown RBP23.53■■□□□ 1.36
U2AF1-204ENST00000459639 BBIP1A8MTZ0 92 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 FOXE1O00358 373 aaPredicted RBP23.52■■□□□ 1.36
U2AF1-204ENST00000459639 AIM2O14862 343 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 PRICKLE3O43900 615 aaPredicted RBP23.52■■□□□ 1.36
U2AF1-204ENST00000459639 SLC22A3O75751 556 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 CELA2BP08218 269 aaPredicted RBP23.52■■□□□ 1.36
U2AF1-204ENST00000459639 G6PDP11413 515 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 TDGF1P13385 188 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 PCSK2P16519 638 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 ITGAXP20702 1163 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 CXCR2P25025 360 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 MAPK1P28482 360 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 NUDT2P50583 147 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 CCR8P51685 355 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 SLC25A3Q00325 362 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 DDX39BQ13838 428 aaKnown RBP23.52■■□□□ 1.36
U2AF1-204ENST00000459639 TSSK4Q6SA08 328 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 WDR5BQ86VZ2 330 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 AMIGO1Q86WK6 493 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 TRIM48Q8IWZ4 208 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 KYQ8NBH2 561 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 OR2A1Q8NGT9 310 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 LCN9Q8WX39 176 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 AIF1LQ9BQI0 150 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 SPNS1Q9H2V7 528 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 MMADHCQ9H3L0 296 aaPredicted RBP23.52■■□□□ 1.36
U2AF1-204ENST00000459639 CAAP1Q9H8G2 361 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 NDE1Q9NXR1 346 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 VPS29Q9UBQ0 182 aa23.52■■□□□ 1.36
U2AF1-204ENST00000459639 CACNA1IQ9P0X4 2223 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms