RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 OR1N1Q8NGS0 311 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 OR9A1PQ8NGU1 263 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 HAS2Q92819 552 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 CABS1Q96KC9 395 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 BIRC8Q96P09 236 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 TSGA10Q9BZW7 698 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 FAM114A2Q9NRY5 505 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 ENTPD4Q9Y227 616 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 CROCCQ5TZA2 2017 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 JRKO75564 520 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 BMP10O95393 424 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 ESR1P03372 595 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 SERPINA7P05543 415 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 PRR35P0CG20 571 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 MYBL2P10244 700 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 ERGP11308 486 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 C1QL3Q5VWW1 255 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 C10orf90Q96M02 699 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 PLCD4Q9BRC7 762 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 DESI2Q9BSY9 194 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 KIFC1Q9BW19 673 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 TGIF2Q9GZN2 237 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 RUBCNLQ9H714 662 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 MRPS30Q9NP92 439 aaKnown RBP20.5■□□□□ 0.87
CPNE1-220ENST00000458038 MKKSQ9NPJ1 570 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-220ENST00000458038 RIC8BQ9NVN3 520 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 VPS9D1Q9Y2B5 631 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 ZKSCAN5Q9Y2L8 839 aa20.5■□□□□ 0.87
CPNE1-220ENST00000458038 MRPS2Q9Y399 296 aaKnown RBP20.5■□□□□ 0.87
CPNE1-220ENST00000458038 IDSB3KWA1 339 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 H0YGG7 62 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 CCNDBP1O95273 360 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 VAPBO95292 243 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 COX6A1P12074 109 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 ICAM2P13598 275 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 NMBRP28336 390 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 RPA3P35244 121 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-220ENST00000458038 SOX11P35716 441 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 ARF3P61204 181 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-220ENST00000458038 CRADDP78560 199 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 TYSND1Q2T9J0 566 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 VWA2Q5GFL6 755 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 CTSL3PQ5NE16 218 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 ZNF324BQ6AW86 544 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-220ENST00000458038 LAPTM4BQ86VI4 370 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 PRSS58Q8IYP2 241 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 DTWD1Q8N5C7 304 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 CATSPER1Q8NEC5 780 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 MAIP1Q8WWC4 291 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 PSMF1Q92530 271 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 LPGAT1Q92604 370 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 RELTQ969Z4 430 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 C8orf44Q96CB5 159 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 TRPC4Q9UBN4 977 aa20.49■□□□□ 0.87
CPNE1-220ENST00000458038 MYO1CO00159 1063 aa20.48■□□□□ 0.87
CPNE1-220ENST00000458038 CATP04040 527 aaKnown RBP20.48■□□□□ 0.87
CPNE1-220ENST00000458038 ANXA5P08758 320 aa20.48■□□□□ 0.87
CPNE1-220ENST00000458038 FMO4P31512 558 aa20.48■□□□□ 0.87
CPNE1-220ENST00000458038 SLC26A3P40879 764 aa20.48■□□□□ 0.87
CPNE1-220ENST00000458038 TNFSF10P50591 281 aa20.48■□□□□ 0.87
CPNE1-220ENST00000458038 BASP1P80723 227 aaKnown RBP20.48■□□□□ 0.87
CPNE1-220ENST00000458038 PRDX1Q06830 199 aaKnown RBP20.48■□□□□ 0.87
CPNE1-220ENST00000458038 FASTKQ14296 549 aaKnown RBP20.48■□□□□ 0.87
CPNE1-220ENST00000458038 PRUNE1Q86TP1 453 aa20.48■□□□□ 0.87
CPNE1-220ENST00000458038 RERGQ96A58 199 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-220ENST00000458038 ACAT2Q9BWD1 397 aa20.48■□□□□ 0.87
CPNE1-220ENST00000458038 RNF32Q9H0A6 362 aa20.48■□□□□ 0.87
CPNE1-220ENST00000458038 RUVBL2Q9Y230 463 aaKnown RBP20.48■□□□□ 0.87
CPNE1-220ENST00000458038 SCN2AQ99250 2005 aa20.48■□□□□ 0.87
CPNE1-220ENST00000458038 A0A0U1RQJ8 604 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 PSIP1O75475 530 aaKnown RBP20.47■□□□□ 0.87
CPNE1-220ENST00000458038 WFS1O76024 890 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 HEXBP07686 556 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 ZSCAN5DPP0CG00 497 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 EZRP15311 586 aaKnown RBP20.47■□□□□ 0.87
CPNE1-220ENST00000458038 CHRM3P20309 590 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 FAM53BQ14153 422 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 RPS6KA1Q15418 735 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 GSTA5Q7RTV2 222 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 PAQR7Q86WK9 346 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 CSNK1A1LQ8N752 337 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 DNAJB8Q8NHS0 232 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 BRIX1Q8TDN6 353 aaKnown RBP20.47■□□□□ 0.87
CPNE1-220ENST00000458038 NR4A3Q92570 626 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 YIPF2Q9BWQ6 316 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 PTGFRNQ9P2B2 879 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 SOX13Q9UN79 622 aa20.47■□□□□ 0.87
CPNE1-220ENST00000458038 CPAMD8Q8IZJ3 1885 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 LOC102723996A0A087X1L8 192 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 IGHV1-45A0A0A0MS14 117 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 ARHGEF33A8MVX0 844 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 NRP2O60462 931 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 ZG16O60844 167 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 UQCRHP07919 91 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 CYC1P08574 325 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 PAMP19021 973 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 TPSB2P20231 275 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 OGNP20774 298 aaKnown RBP20.46■□□□□ 0.87
CPNE1-220ENST00000458038 ARNTP27540 789 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 TNFRSF8P28908 595 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms