RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 ADAM8P78325 824 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 FAPQ12884 760 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 PON3Q15166 354 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 SF3B4Q15427 424 aaKnown RBP eCLIP4.88□□□□□ -1.63
PCDH9-203ENST00000456367 NTRK2Q16620 822 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 NHSL2Q5HYW2 709 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 PRAMEF17Q5VTA0 474 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 METTL11BQ5VVY1 283 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 PDE12Q6L8Q7 609 aaKnown RBP4.88□□□□□ -1.63
PCDH9-203ENST00000456367 C2CD4AQ8NCU7 369 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-203ENST00000456367 OR8J1Q8NGP2 316 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 OR8K3Q8NH51 312 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 SYT11Q9BT88 431 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 DUSP26Q9BV47 211 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 COLEC11Q9BWP8 271 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 FAM117AQ9C073 453 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 C11orf16Q9NQ32 467 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 DDX4Q9NQI0 724 aaKnown RBP4.88□□□□□ -1.63
PCDH9-203ENST00000456367 ERVK13-1Q9NX77 482 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 CNOT2Q9NZN8 540 aaKnown RBP4.88□□□□□ -1.63
PCDH9-203ENST00000456367 DLG5Q8TDM6 1919 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 A0A075B6Q4 140 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 DAPL1A0PJW8 107 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 YDJCA8MPS7 323 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 WASH4PA8MWX3 477 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 CBX4O00257 560 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 PLATP00750 562 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 AHSGP02765 367 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 C8GP07360 202 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 USP17L7P0C7H9 530 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 GADD45AP24522 165 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 PCSK6P29122 969 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 SERPINA4P29622 427 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 MC4RP32245 332 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 CDKN2CP42773 168 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 GUCA1AP43080 201 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-203ENST00000456367 NRIP1P48552 1158 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 DSTNP60981 165 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 KCNC4Q03721 635 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 LRP8Q14114 963 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 SEC23BQ15437 767 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 SLC36A4Q6YBV0 504 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 NUDT18Q6ZVK8 323 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 SNX20Q7Z614 316 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 LGI2Q8N0V4 545 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 PARP16Q8N5Y8 322 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 PSD4Q8NDX1 1056 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 OR9I1Q8NGQ6 314 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 TFAP2BQ92481 460 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 PIWIL1Q96J94 861 aaKnown RBP4.88□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF382Q96SR6 550 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 NIFKQ9BYG3 293 aaKnown RBP4.88□□□□□ -1.63
PCDH9-203ENST00000456367 CST11Q9H112 138 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 UNKLQ9H9P5 680 aaKnown RBP4.88□□□□□ -1.63
PCDH9-203ENST00000456367 AMBNQ9NP70 447 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 FANCFQ9NPI8 374 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 ABI2Q9NYB9 513 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-203ENST00000456367 TAS2R10Q9NYW0 307 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 ACTR10Q9NZ32 417 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF639Q9UID6 485 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 KLK4Q9Y5K2 254 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 FKBP7Q9Y680 259 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 CLCA3PQ9Y6N3 262 aa4.88□□□□□ -1.63
PCDH9-203ENST00000456367 TSPOAP1O95153 1857 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 GLYATL1P3A0A0U1RQE8 302 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 LCHNA4D1U4 455 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 GPR182O15218 404 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 LRATO95237 230 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CPNE6O95741 557 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 H1F0P07305 194 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 PET100P0DJ07 73 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 BMP4P12644 408 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TYRP14679 529 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 KELP23276 732 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ARL2P36404 184 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 UFM1P61960 85 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ELAVL2Q12926 359 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SPCS2Q15005 226 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TECRLQ5HYJ1 363 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 NCBP2-AS2Q69YL0 99 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 PIWIL3Q7Z3Z3 882 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF438Q7Z4V0 828 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TMEM135Q86UB9 458 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 FTMTQ8N4E7 242 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 AGBL3Q8NEM8 1001 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 OR52J3Q8NH60 311 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 NDNFQ8TB73 568 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SLC22A17Q8WUG5 538 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 HSH2DQ96JZ2 352 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 OR4K3Q96R72 315 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 PDGFDQ9GZP0 370 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 OCEL1Q9H607 264 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TRPV4Q9HBA0 871 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SLC35C2Q9NQQ7 365 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ITM2CQ9NQX7 267 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 MS4A12Q9NXJ0 267 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 EIF2B4Q9UI10 523 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 PCDHB5Q9Y5E4 795 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 A0A1W2PQ67 120 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 RAB19A4D1S5 217 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms