RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 NFKBIL1Q9UBC1 381 aaPredicted RBP19.46■□□□□ 0.71
CSPG5-203ENST00000456150 RPS6KA6Q9UK32 745 aa19.46■□□□□ 0.71
CSPG5-203ENST00000456150 RUVBL1Q9Y265 456 aaKnown RBP19.46■□□□□ 0.71
CSPG5-203ENST00000456150 CLIC1O00299 241 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 CCL16O15467 120 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 SGTAO43765 313 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 B3GALT4O96024 378 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 ITGAMP11215 1152 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 CCNA2P20248 432 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 MATN1P21941 496 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 DDX6P26196 483 aaKnown RBP eCLIP19.45■□□□□ 0.7
CSPG5-203ENST00000456150 RYKP34925 604 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 ARHGDIAP52565 204 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 C21orf58P58505 322 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 CD47Q08722 323 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 SPIDRQ14159 915 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 SYTL3Q4VX76 610 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 THOC6Q86W42 341 aaKnown RBP19.45■□□□□ 0.7
CSPG5-203ENST00000456150 SPARTQ8N0X7 666 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 OR8J2Q8NGG1 315 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 RAB2BQ8WUD1 216 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 NAA50Q9GZZ1 169 aaKnown RBP19.45■□□□□ 0.7
CSPG5-203ENST00000456150 GABARAPL1Q9H0R8 117 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 TMEFF2Q9UIK5 374 aaPredicted RBP19.45■□□□□ 0.7
CSPG5-203ENST00000456150 PSIP1O75475 530 aaKnown RBP19.45■□□□□ 0.7
CSPG5-203ENST00000456150 MYO1DO94832 1006 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 CXCL14O95715 111 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 ZNF682O95780 498 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 HSD3B1P14060 373 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 COX7A2P14406 83 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 PRKACGP22612 351 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 HSD3B2P26439 372 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 ENTPD1P49961 510 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 GALK1P51570 392 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 PPP1R8Q12972 351 aaKnown RBP19.45■□□□□ 0.7
CSPG5-203ENST00000456150 SLC14A1Q13336 389 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 UGT8Q16880 541 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 CTU2Q2VPK5 515 aaKnown RBP19.45■□□□□ 0.7
CSPG5-203ENST00000456150 FGD3Q5JSP0 725 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 CPZQ66K79 652 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 ZCCHC8Q6NZY4 707 aaKnown RBP19.45■□□□□ 0.7
CSPG5-203ENST00000456150 DRAXINQ8NBI3 349 aaPredicted RBP19.45■□□□□ 0.7
CSPG5-203ENST00000456150 OR7A2PQ8NGA2 310 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 WDR20Q8TBZ3 569 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 SNX19Q92543 992 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 IRF7Q92985 503 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 CCDC138Q96M89 665 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 FAM83CQ9BQN1 747 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 SPATA6Q9NWH7 488 aaPredicted RBP19.45■□□□□ 0.7
CSPG5-203ENST00000456150 SNX5Q9Y5X3 404 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 U3KQV3 271 aa19.45■□□□□ 0.7
CSPG5-203ENST00000456150 KRT87PA6NCN2 255 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 MAGEB17A8MXT2 336 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 UPK3BL1B0FP48 263 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 UPK3BL2E5RIL1 263 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 TYRP14679 529 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 ENGP17813 658 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 HNF4AP41235 474 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 ACSM2AQ08AH3 577 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 VMACQ2NL98 169 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 ZNF284Q2VY69 593 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 HENMT1Q5T8I9 393 aaKnown RBP19.44■□□□□ 0.7
CSPG5-203ENST00000456150 ACSM2BQ68CK6 577 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 Q6ZVL8 140 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 RBM23Q86U06 439 aaKnown RBP19.44■□□□□ 0.7
CSPG5-203ENST00000456150 ADIPOR2Q86V24 386 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 RAVER1Q8IY67 606 aaKnown RBP19.44■□□□□ 0.7
CSPG5-203ENST00000456150 SLC22A15Q8IZD6 547 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 LHPPQ9H008 270 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 PREBQ9HCU5 417 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 TM9SF3Q9HD45 589 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 IL1RAPQ9NPH3 570 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 MAPRE3Q9UPY8 281 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 ERVW-1Q9UQF0 538 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 TSPAN11A1L157 253 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 OR2AG2A6NM03 316 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 ARHGEF33A8MVX0 844 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 BCKDKO14874 412 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 UGT2B11O75310 529 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 DNAJB5O75953 348 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 FGF19O95750 216 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 CATP04040 527 aaKnown RBP19.44■□□□□ 0.7
CSPG5-203ENST00000456150 GPX2P18283 190 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 POLR2EP19388 210 aaKnown RBP19.44■□□□□ 0.7
CSPG5-203ENST00000456150 CD22P20273 847 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 IGFBP5P24593 272 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 CCR2P41597 374 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 MAPK9P45984 424 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 ISL1P61371 349 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 NFATC3Q12968 1075 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 LDLRAP1Q5SW96 308 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 ANKRD34AQ69YU3 496 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 OR2T5Q6IEZ7 315 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 GRHL2Q6ISB3 625 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 ZNF551Q7Z340 670 aaPredicted RBP19.44■□□□□ 0.7
CSPG5-203ENST00000456150 KLHDC8AQ8IYD2 350 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 ZZZ3Q8IYH5 903 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 CHPFQ8IZ52 775 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 SETD9Q8NE22 299 aa19.44■□□□□ 0.7
CSPG5-203ENST00000456150 OR2T29Q8NH02 315 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms