RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 HPS4Q9NQG7 708 aa17.61■□□□□ 0.41
MECP2-205ENST00000453960 THG1LQ9NWX6 298 aaKnown RBP17.61■□□□□ 0.41
MECP2-205ENST00000453960 LIMD1Q9UGP4 676 aa17.61■□□□□ 0.41
MECP2-205ENST00000453960 MRPS23Q9Y3D9 190 aaKnown RBP17.61■□□□□ 0.41
MECP2-205ENST00000453960 E7EQ34 232 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 ZNF701M0R085 212 aaPredicted RBP17.6■□□□□ 0.41
MECP2-205ENST00000453960 RECQL5O94762 991 aaPredicted RBP17.6■□□□□ 0.41
MECP2-205ENST00000453960 GPX2P18283 190 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 CDK9P50750 372 aaKnown RBP17.6■□□□□ 0.41
MECP2-205ENST00000453960 DUOXA1Q1HG43 343 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 HNRNPA1L2Q32P51 320 aaKnown RBP17.6■□□□□ 0.41
MECP2-205ENST00000453960 CCSMST1Q4G0I0 132 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 SYTL3Q4VX76 610 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 TCEAL5Q5H9L2 206 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 C9orf64Q5T6V5 341 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 PDE12Q6L8Q7 609 aaKnown RBP17.6■□□□□ 0.41
MECP2-205ENST00000453960 TMEM214Q6NUQ4 689 aaKnown RBP17.6■□□□□ 0.41
MECP2-205ENST00000453960 TMEM220Q6QAJ8 160 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 DNAJC14Q6Y2X3 702 aaPredicted RBP17.6■□□□□ 0.41
MECP2-205ENST00000453960 GCNT7Q6ZNI0 430 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 UBE2Q1Q7Z7E8 422 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 CHPFQ8IZ52 775 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 STARD8Q92502 1023 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 NMD3Q96D46 503 aaKnown RBP17.6■□□□□ 0.41
MECP2-205ENST00000453960 AURKBQ96GD4 344 aaPredicted RBP17.6■□□□□ 0.41
MECP2-205ENST00000453960 OSBPL10Q9BXB5 764 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 V9GYQ6 96 aa17.6■□□□□ 0.41
MECP2-205ENST00000453960 H3BSA7 217 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 PRKD3O94806 890 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 ST8SIA6P61647 398 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 RAE1P78406 368 aaKnown RBP17.59■□□□□ 0.41
MECP2-205ENST00000453960 EPS8Q12929 822 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 NAE1Q13564 534 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 ACOX1Q15067 660 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 XKR6Q5GH73 641 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 GALNT18Q6P9A2 607 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 ZNF786Q8N393 782 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 ZCCHC7Q8N3Z6 543 aaKnown RBP17.59■□□□□ 0.41
MECP2-205ENST00000453960 LILRA3Q8N6C8 439 aaPredicted RBP17.59■□□□□ 0.41
MECP2-205ENST00000453960 FBXO30Q8TB52 745 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 CYGBQ8WWM9 190 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 ING5Q8WYH8 240 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 FAM162AQ96A26 154 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 ARRDC3Q96B67 414 aa17.59■□□□□ 0.41
MECP2-205ENST00000453960 REXO4Q9GZR2 422 aaKnown RBP17.59■□□□□ 0.41
MECP2-205ENST00000453960 NUP214P35658 2090 aaPredicted RBP17.59■□□□□ 0.41
MECP2-205ENST00000453960 C17orf113A0A1B0GUU1 675 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 PRRT4C9JH25 899 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 RFXANKO14593 260 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 C1orf105O95561 183 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 SLC16A8O95907 504 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 THRBP10828 461 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 SLC5A2P31639 672 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 PREPP48147 710 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 ELP6Q0PNE2 266 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 EIF4HQ15056 248 aaKnown RBP17.58■□□□□ 0.41
MECP2-205ENST00000453960 CCNYL2Q5T2Q4 361 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 OR4F3Q6IEY1 312 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 SLCO4C1Q6ZQN7 724 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 PNPT1Q8TCS8 783 aaKnown RBP17.58■□□□□ 0.41
MECP2-205ENST00000453960 NETO1Q8TDF5 533 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 CHTF18Q8WVB6 975 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 NXPE3Q969Y0 559 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 TBCDQ9BTW9 1192 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 SGPP1Q9BX95 441 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 CHD7Q9P2D1 2997 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 ERVK-11Q9UQG0 969 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 ITM2BQ9Y287 266 aa17.58■□□□□ 0.41
MECP2-205ENST00000453960 EDDM13A0A1B0GTR0 161 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 G3V2T6 193 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 CLGNO14967 610 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 CCNDBP1O95273 360 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 B3GALT4O96024 378 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 ALBP02768 609 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 SEMG1P04279 462 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 ASMTP46597 345 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 HLCSP50747 726 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 CDH15P55291 814 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 MESP2Q0VG99 397 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 ZBED5Q49AG3 693 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 TMEM52BQ4KMG9 183 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 CPZQ66K79 652 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 ZDHHC13Q8IUH4 622 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 SYT12Q8IV01 421 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 LRRC56Q8IYG6 542 aaPredicted RBP17.58■□□□□ 0.4
MECP2-205ENST00000453960 RNF175Q8N4F7 328 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 TMIGD2Q96BF3 282 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 PYURFQ96I23 114 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 FOPNLQ96NB1 174 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 SPATA9Q9BWV2 254 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 ZCCHC2Q9C0B9 1178 aaKnown RBP17.58■□□□□ 0.4
MECP2-205ENST00000453960 EHD1Q9H4M9 534 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 BTNL2Q9UIR0 455 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 TSC22D4Q9Y3Q8 395 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 AP1M2Q9Y6Q5 423 aa17.58■□□□□ 0.4
MECP2-205ENST00000453960 CST1P01037 141 aa17.57■□□□□ 0.4
MECP2-205ENST00000453960 ABCB1P08183 1280 aaPredicted RBP17.57■□□□□ 0.4
MECP2-205ENST00000453960 PDHA2P29803 388 aa17.57■□□□□ 0.4
MECP2-205ENST00000453960 BDKRB1P46663 353 aa17.57■□□□□ 0.4
MECP2-205ENST00000453960 SLC14A1Q13336 389 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms