RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 IL20Q9NYY1 176 aa18.14■□□□□ 0.49
PTPA-223ENST00000452489 PGAP2Q9UHJ9 254 aa18.14■□□□□ 0.49
PTPA-223ENST00000452489 NDRG2Q9UN36 371 aaKnown RBP18.14■□□□□ 0.49
PTPA-223ENST00000452489 I6L893 689 aaPredicted RBP18.13■□□□□ 0.49
PTPA-223ENST00000452489 M0R129 80 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 GFRA2O00451 464 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 STX16O14662 325 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 TSPAN19P0C672 248 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 ERVK-21P61565 698 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 CSNK2BP67870 215 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 RAD9AQ99638 391 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 RTP3Q9BQQ7 232 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 SLC6A17Q9H1V8 727 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 DBNDD1Q9H9R9 158 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 GRXCR2A6NFK2 248 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 G3V3G9 751 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 M0QYT0 321 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 EFNA5P52803 228 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 TPI1P60174 286 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 OLR1P78380 273 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 SP2Q02086 613 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 RPA4Q13156 261 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 CDH18Q13634 790 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 OR6C4Q8NGE1 309 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 ESAMQ96AP7 390 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 DIRAS2Q96HU8 199 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 CDT1Q9H211 546 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 SLC6A13Q9NSD5 602 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 PIGVQ9NUD9 493 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 SAMHD1Q9Y3Z3 626 aaKnown RBP18.13■□□□□ 0.49
PTPA-223ENST00000452489 SNX10Q9Y5X0 201 aa18.13■□□□□ 0.49
PTPA-223ENST00000452489 KIAA1217Q5T5P2 1943 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 NCF1BA6NI72 391 aaPredicted RBP18.12■□□□□ 0.49
PTPA-223ENST00000452489 NCF1CA8MVU1 366 aaPredicted RBP18.12■□□□□ 0.49
PTPA-223ENST00000452489 SUPT3HB4E1H0 165 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 SEC14L5O43304 696 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 SGTAO43765 313 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 PTP4A3O75365 173 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 TPOP07202 933 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 GJB1P08034 283 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 NCF1P14598 390 aaPredicted RBP18.12■□□□□ 0.49
PTPA-223ENST00000452489 MAGEA2P43356 314 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 MAN2A2P49641 1150 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 CXCR3P49682 368 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 AGTR2P50052 363 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 RORCP51449 518 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 IKZF1Q13422 519 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 ANGPT1Q15389 498 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 TUSC1Q2TAM9 212 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 CLLU1Q5K131 121 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 C19orf48Q6RUI8 117 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 Q6ZSR9 355 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 PDZD4Q76G19 769 aaPredicted RBP18.12■□□□□ 0.49
PTPA-223ENST00000452489 TRILQ7L0X0 811 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 GALNT10Q86SR1 603 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 LRRC71Q8N4P6 559 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 GPR152Q8TDT2 470 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 PHF21AQ96BD5 680 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 B3GALT6Q96L58 329 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 RDH8Q9NYR8 311 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 MAFBQ9Y5Q3 323 aaPredicted RBP18.12■□□□□ 0.49
PTPA-223ENST00000452489 PAHP00439 452 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 DNAJA1P31689 397 aaKnown RBP18.12■□□□□ 0.49
PTPA-223ENST00000452489 TIMM50Q3ZCQ8 353 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 LRFN4Q6PJG9 635 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 KRT73Q86Y46 540 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 BTN2A2Q8WVV5 523 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 ZBED6CLQ96FA7 236 aaPredicted RBP18.12■□□□□ 0.49
PTPA-223ENST00000452489 HRASLS5Q96KN8 279 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 FOPNLQ96NB1 174 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 OPALINQ96PE5 141 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 ATOH8Q96SQ7 321 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 FAM8A1Q9UBU6 413 aa18.12■□□□□ 0.49
PTPA-223ENST00000452489 POLR3HQ9Y535 204 aaPredicted RBP18.12■□□□□ 0.49
PTPA-223ENST00000452489 PRR23AA6NEV1 266 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 OR51F1A6NGY5 319 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 FZD6O60353 706 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 FPR1P21462 350 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 CCNCP24863 283 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 LCN1P1Q5VSP4 162 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 LPCAT1Q8NF37 534 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 OR11H4Q8NGC9 324 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 OR52E4Q8NGH9 312 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 OR6M1Q8NGM8 313 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 CEP76Q8TAP6 659 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 SLC16A10Q8TF71 515 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 SLC13A3Q8WWT9 602 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 PTP4A1Q93096 173 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 CDK15Q96Q40 435 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 PLCXD1Q9NUJ7 323 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 COPS3Q9UNS2 423 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 ZNF451Q9Y4E5 1061 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 LOC102723532A0A0G2JNH3 316 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 PER2O15055 1255 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 HOXB1P14653 301 aaPredicted RBP18.11■□□□□ 0.49
PTPA-223ENST00000452489 SSTR2P30874 369 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 IDH2P48735 452 aaKnown RBP18.11■□□□□ 0.49
PTPA-223ENST00000452489 RUNX1T1Q06455 604 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 LAMTOR4Q0VGL1 99 aa18.11■□□□□ 0.49
PTPA-223ENST00000452489 CDAN1Q8IWY9 1227 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms