RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 VPS4BO75351 444 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 IGHEP01854 428 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 MSH2P43246 934 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 TSTA3Q13630 321 aaPredicted RBP20.78■□□□□ 0.92
C9orf3-208ENST00000451893 THOC5Q13769 683 aaKnown RBP20.78■□□□□ 0.92
C9orf3-208ENST00000451893 SSPNQ14714 243 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 LONRF1Q17RB8 773 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 TTMPQ5BVD1 217 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 LGSNQ5TDP6 509 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 DNAJC22Q8N4W6 341 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 ARFGAP2Q8N6H7 521 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 CLEC1AQ8NC01 280 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 ADAMTS17Q8TE56 1095 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 FAM136AQ96C01 138 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 TLCD1Q96CP7 247 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 P2RY12Q9H244 342 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 PSMC3IPQ9P2W1 217 aaPredicted RBP20.78■□□□□ 0.92
C9orf3-208ENST00000451893 VPS4AQ9UN37 437 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 CRYL1Q9Y2S2 319 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 ACTL7BQ9Y614 415 aa20.78■□□□□ 0.92
C9orf3-208ENST00000451893 FAM159BA6NKW6 160 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 CRYMQ14894 314 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 CYP2A13Q16696 494 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 NKAIN1Q4KMZ8 207 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 ANKRD20A4Q4UJ75 823 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 FIGLAQ6QHK4 219 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 ADGRD1Q6QNK2 874 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 TTLL10Q6ZVT0 673 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 TAOK1Q7L7X3 1001 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 MCATQ8IVS2 390 aaKnown RBP20.77■□□□□ 0.92
C9orf3-208ENST00000451893 ZBTB2Q8N680 514 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 LMNTD1Q8N9Z9 388 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 LINC01555Q8NAE3 123 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 FLVCR1-AS1Q8TAF5 88 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 EPS8L3Q8TE67 593 aaKnown RBP20.77■□□□□ 0.92
C9orf3-208ENST00000451893 ZNF669Q96BR6 464 aaPredicted RBP20.77■□□□□ 0.92
C9orf3-208ENST00000451893 GBP5Q96PP8 586 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 TCF12Q99081 682 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 SELENOSQ9BQE4 189 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 SENP1Q9P0U3 644 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 ZNF180Q9UJW8 692 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 PCDHGB7Q9Y5F8 929 aa20.77■□□□□ 0.92
C9orf3-208ENST00000451893 POC1B-GALNT4F8VUJ3 575 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 NIPSNAP2O75323 286 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 FKBP9O95302 570 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 C1orf105O95561 183 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 ESR1P03372 595 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 PDGFAP04085 211 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 CAPN1P07384 714 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 OGNP20774 298 aaKnown RBP20.76■□□□□ 0.91
C9orf3-208ENST00000451893 GRIA3P42263 894 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 MGAT5Q09328 741 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 RAPSNQ13702 412 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 GRM7Q14831 915 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 TCTE1Q5JU00 501 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 KIAA0930Q6ICG6 404 aaPredicted RBP20.76■□□□□ 0.91
C9orf3-208ENST00000451893 CAPN12Q6ZSI9 719 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 SLC26A11Q86WA9 606 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.76■□□□□ 0.91
C9orf3-208ENST00000451893 FDCSPQ8NFU4 85 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 GABPB2Q8TAK5 448 aaPredicted RBP20.76■□□□□ 0.91
C9orf3-208ENST00000451893 FAM76AQ8TAV0 307 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 SLC44A1Q8WWI5 657 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 MIPEPQ99797 713 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 PLAC1Q9HBJ0 212 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 SLAMF7Q9NQ25 335 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 NOVA2Q9UNW9 492 aaKnown RBP20.76■□□□□ 0.91
C9orf3-208ENST00000451893 RUVBL2Q9Y230 463 aaKnown RBP20.76■□□□□ 0.91
C9orf3-208ENST00000451893 FLNBO75369 2602 aaKnown RBP20.76■□□□□ 0.91
C9orf3-208ENST00000451893 FER1L5A0AVI2 2057 aa20.76■□□□□ 0.91
C9orf3-208ENST00000451893 A0A1B0GX78 115 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 HCRTR1O43613 425 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 KLHL41O60662 606 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 ALPPP05187 535 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 INHBAP08476 426 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 ERVK-10P10266 1014 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 CNTFP26441 200 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 SLCO1A2P46721 670 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 GABRA4P48169 554 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 SERPINB9P50453 376 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 NAA25Q14CX7 972 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 TTLL9Q3SXZ7 439 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 TUBB8Q3ZCM7 444 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 KBTBD12Q3ZCT8 623 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 CTSL3PQ5NE16 218 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 ZNF385CQ66K41 422 aaPredicted RBP20.75■□□□□ 0.91
C9orf3-208ENST00000451893 MRGPREQ86SM8 312 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 HPS6Q86YV9 775 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 CPT1CQ8TCG5 803 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 PTERQ96BW5 349 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 PAFAH2Q99487 392 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 NSMCE4AQ9NXX6 385 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 SPATA7Q9P0W8 599 aa20.75■□□□□ 0.91
C9orf3-208ENST00000451893 IQANK1A0A1B0GTG1 560 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 C1QAP02745 245 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 CTSBP07858 339 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 GCAP28676 217 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 CMPK1P30085 196 aa20.74■□□□□ 0.91
C9orf3-208ENST00000451893 ILF2Q12905 390 aaKnown RBP20.74■□□□□ 0.91
C9orf3-208ENST00000451893 TYSND1Q2T9J0 566 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms