RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 ANKRD27Q96NW4 1050 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 IL17FQ96PD4 163 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 ZNF184Q99676 751 aaPredicted RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 EHD1Q9H4M9 534 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 ZNF576Q9H609 170 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 BRF2Q9HAW0 419 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 ACTR3BQ9P1U1 418 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 H0Y8X5 98 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 IFRD1O00458 451 aaPredicted RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 DENRO43583 198 aaKnown RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 NPPAP01160 153 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 FTH1P02794 183 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 EPB42P16452 691 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 GGT1P19440 569 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 C5AR1P21730 350 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 PSMB5P28074 263 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 WASP42768 502 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 ELP6Q0PNE2 266 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 GPR153Q6NV75 609 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 SPRED1Q7Z699 444 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 TMEM179BQ7Z7N9 219 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 SFTPA2Q8IWL1 248 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 KIRREL3Q8IZU9 778 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 TCAIMQ8N3R3 496 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 SLC44A3Q8N4M1 653 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 ANKFN1Q8N957 763 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 FNDC5Q8NAU1 212 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 MTFMTQ96DP5 389 aaKnown RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 HOPXQ9BPY8 73 aaPredicted RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 PIDD1Q9HB75 910 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 VNN3Q9NY84 501 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 KLQ9UEF7 1012 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 ZNHIT2Q9UHR6 403 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 CNOT11Q9UKZ1 510 aaKnown RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 PLAGL1Q9UM63 463 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 NDUFAF1Q9Y375 327 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 DMXL1Q9Y485 3027 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 LIN7AO14910 233 aaPredicted RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 LINGO3P0C6S8 592 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 BMP2P12643 396 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 RGS4P49798 205 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 ATXN3P54252 364 aaPredicted RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 SEC13P55735 322 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 MYBPC1Q00872 1141 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 ABRQ12979 859 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 CSTF3Q12996 717 aaKnown RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 ARHGEF7Q14155 803 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 MTX3Q5HYI7 312 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 FRG2Q64ET8 278 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 LAYNQ6UX15 382 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 CARM1Q86X55 608 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 PGBD3Q8N328 593 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 ZNF513Q8N8E2 541 aaPredicted RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 ABHD11Q8NFV4 315 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 OR8J2Q8NGG1 315 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 GOT1L1Q8NHS2 421 aaPredicted RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 HUS1BQ8NHY5 278 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 CCDC138Q96M89 665 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 FRG2BQ96QU4 278 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 RHBGQ9H310 441 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 RAD18Q9NS91 495 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.35□□□□□ -1.39
USP46-202ENST00000451218 WWOXQ9NZC7 414 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 CROTQ9UKG9 612 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 PCDHB3Q9Y5E6 796 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 AK5Q9Y6K8 562 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 LOC400499M0QZD8 3231 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 POM121BA6NF01 834 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 NVLO15381 856 aaKnown RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 SYNCRIPO60506 623 aaKnown RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 SNX2O60749 519 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 PGRP06401 933 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 NCK1P16333 377 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 TCN1P20061 433 aaPredicted RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 SLC7A1P30825 629 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 MAGEA2P43356 314 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 MTPNP58546 118 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 CTBSQ01459 385 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 CPSF6Q16630 551 aaKnown RBP eCLIP6.35□□□□□ -1.39
USP46-202ENST00000451218 ATP6AP1LQ52LC2 224 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 ANKRD34AQ69YU3 496 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 RAB44Q7Z6P3 723 aaPredicted RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 OR8J3Q8NGG0 315 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 SARGQ9BW04 601 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 LRTM1Q9HBL6 345 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 SLC6A20Q9NP91 592 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 CUEDC1Q9NWM3 386 aaPredicted RBP6.35□□□□□ -1.39
USP46-202ENST00000451218 C1orf109Q9NX04 203 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 FRYQ5TBA9 3013 aa6.35□□□□□ -1.39
USP46-202ENST00000451218 MGAT4DA6NG13 374 aa6.34□□□□□ -1.39
USP46-202ENST00000451218 FOXE1O00358 373 aaPredicted RBP6.34□□□□□ -1.39
USP46-202ENST00000451218 HOXC4P09017 264 aaPredicted RBP6.34□□□□□ -1.39
USP46-202ENST00000451218 ZNF33BQ06732 778 aa6.34□□□□□ -1.39
USP46-202ENST00000451218 STX5Q13190 355 aa6.34□□□□□ -1.39
USP46-202ENST00000451218 PWP1Q13610 501 aa6.34□□□□□ -1.39
USP46-202ENST00000451218 FAM174BQ3ZCQ3 159 aa6.34□□□□□ -1.39
USP46-202ENST00000451218 NOXRED1Q6NXP6 359 aa6.34□□□□□ -1.39
USP46-202ENST00000451218 ERAP2Q6P179 960 aa6.34□□□□□ -1.39
USP46-202ENST00000451218 IZUMO2Q6UXV1 221 aa6.34□□□□□ -1.39
USP46-202ENST00000451218 ZNF852Q6ZMS4 543 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms