RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 RPA3P35244 121 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 RGS4P49798 205 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 EMP3P54852 163 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 FOXL2P58012 376 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 GPX6P59796 221 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 IL2P60568 153 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 ARF3P61204 181 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 GRM7Q14831 915 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 FAM214AQ32MH5 1076 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 MLIPQ5VWP3 458 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 TCTN3Q6NUS6 607 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 COX15Q7KZN9 410 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 OVCH1Q7RTY7 1134 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 STRA8Q7Z7C7 330 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 SLC26A11Q86WA9 606 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 DTWD1Q8N5C7 304 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 LINGO1Q96FE5 620 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 ZFYVE21Q9BQ24 234 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 C17orf62Q9BQA9 187 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 SGPP1Q9BX95 441 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 SLC7A5P2Q9GIP4 190 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 SLC26A1Q9H2B4 701 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 CUEDC1Q9NWM3 386 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 MAN2B2Q9Y2E5 1009 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 UBR5O95071 2799 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 LRRK2Q5S007 2527 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 PCSK5Q92824 1860 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 HYKKA2RU49 373 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 C9J4A7 227 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 CEACAM4O75871 244 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 DNAJB5O75953 348 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 SYF2O95926 243 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 ALBP02768 609 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 ALAS2P22557 587 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 PLTPP55058 493 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 TAS2R39P59534 338 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 CALCOCO2Q13137 446 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 SP140Q13342 867 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 SSPNQ14714 243 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 NAA25Q14CX7 972 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 FAM45BPQ6NSW5 357 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 AGTRAPQ6RW13 159 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 MBOAT1Q6ZNC8 495 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 CEP97Q8IW35 865 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 GPATCH11Q8N954 259 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 OR2Y1Q8NGV0 311 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 C9orf43Q8TAL5 461 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 FAM45AQ8TCE6 357 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 FBXO25Q8TCJ0 367 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 PYROXD1Q8WU10 500 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 ANKRD7Q92527 254 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 PTERQ96BW5 349 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 C10orf90Q96M02 699 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 PHACTR1Q9C0D0 580 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 ING2Q9H160 280 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 SAYSD1Q9NPB0 183 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 ZNF71Q9NQZ8 489 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 TXLNGQ9NUQ3 528 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 ZFATQ9P243 1243 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 IFT80Q9P2H3 777 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 SH2B3Q9UQQ2 575 aa13.44□□□□□ -0.26
RTFDC1-204ENST00000449062 KCNE1BA0A087WTH5 132 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 FAM159BA6NKW6 160 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 VSTM2BA6NLU5 285 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 H7BY64 318 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 RFPL1O75677 317 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 PDGFAP04085 211 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 CD63P08962 238 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 SNRPNP63162 240 aaKnown RBP13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 CAV1Q03135 178 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 PDAP1Q13442 181 aaKnown RBP13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 NAE1Q13564 534 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 SLC9A5Q14940 896 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 NKG7Q16617 165 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 PPP1R3AQ16821 1122 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 CPZQ66K79 652 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 SBSNQ6UWP8 590 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 C3orf62Q6ZUJ4 267 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 MYO1HQ8N1T3 1032 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 OR56A3Q8NH54 315 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 ANKRD49Q8WVL7 239 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 FKBP10Q96AY3 582 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 PRAP1Q96NZ9 151 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 SPSB2Q99619 263 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 LRRC1Q9BTT6 524 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 RHOJQ9H4E5 214 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 ZDHHC18Q9NUE0 388 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 TMEM184CQ9NVA4 438 aa13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 MTO1Q9Y2Z2 717 aaKnown RBP13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 UTP11Q9Y3A2 253 aaKnown RBP13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 PTRH2Q9Y3E5 179 aaKnown RBP13.43□□□□□ -0.26
RTFDC1-204ENST00000449062 SETXQ7Z333 2677 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 FAM95CA0A1B0GW59 222 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 TCRBV9S1A1TA0A576 114 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 ARGFXA6NJG6 315 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 MKRN2OSH3BPM6 223 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 HAT1O14929 419 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 CCNDBP1O95273 360 aa13.42□□□□□ -0.26
RTFDC1-204ENST00000449062 GSTA2P09210 222 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms