RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 RGS4P49798 205 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 ARF3P61204 181 aaPredicted RBP18.81■□□□□ 0.6
VCP-203ENST00000448530 YBX1P67809 324 aaKnown RBP18.81■□□□□ 0.6
VCP-203ENST00000448530 ABATP80404 500 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 DHX9Q08211 1270 aaKnown RBP18.81■□□□□ 0.6
VCP-203ENST00000448530 AIMP2Q13155 320 aaKnown RBP18.81■□□□□ 0.6
VCP-203ENST00000448530 RBBP7Q16576 425 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 BBS9Q3SYG4 887 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 IRAK1BP1Q5VVH5 260 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 FBXO42Q6P3S6 717 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 SHISA6Q6ZSJ9 500 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 UBE2R2Q712K3 238 aaPredicted RBP18.81■□□□□ 0.6
VCP-203ENST00000448530 COX15Q7KZN9 410 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 ADCK2Q7Z695 626 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 PALM2Q8IXS6 379 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 PPFIBP2Q8ND30 876 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 TM9SF4Q92544 642 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 CAPZA3Q96KX2 299 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 RUNDC3BQ96NL0 473 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 SOX17Q9H6I2 414 aaPredicted RBP18.81■□□□□ 0.6
VCP-203ENST00000448530 TAS2R13Q9NYV9 303 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 MAP10Q9P2G4 905 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 CTSFQ9UBX1 484 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 FBXL4Q9UKA2 621 aa18.81■□□□□ 0.6
VCP-203ENST00000448530 E7ENX8 843 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 GFYI3L273 518 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 EZRP15311 586 aaKnown RBP18.8■□□□□ 0.6
VCP-203ENST00000448530 FBLP22087 321 aaKnown RBP18.8■□□□□ 0.6
VCP-203ENST00000448530 ITGA3P26006 1051 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 VARSP26640 1264 aaKnown RBP18.8■□□□□ 0.6
VCP-203ENST00000448530 SKIV2L2P42285 1042 aaKnown RBP18.8■□□□□ 0.6
VCP-203ENST00000448530 GNG11P61952 73 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 TAP2Q03519 686 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 UBAP2LQ14157 1087 aaKnown RBP18.8■□□□□ 0.6
VCP-203ENST00000448530 SYDE1Q6ZW31 735 aaPredicted RBP18.8■□□□□ 0.6
VCP-203ENST00000448530 PIWIL4Q7Z3Z4 852 aaKnown RBP18.8■□□□□ 0.6
VCP-203ENST00000448530 PAQR7Q86WK9 346 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 KLHL7Q8IXQ5 586 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 PDIK1LQ8N165 341 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 CSNK1A1LQ8N752 337 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 C2CD4AQ8NCU7 369 aaPredicted RBP18.8■□□□□ 0.6
VCP-203ENST00000448530 MCOLN3Q8TDD5 553 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 PNPLA2Q96AD5 504 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 NDNQ99608 321 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 SPSB2Q99619 263 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 PPANQ9NQ55 473 aaKnown RBP18.8■□□□□ 0.6
VCP-203ENST00000448530 SEMA3GQ9NS98 782 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 LUZP4Q9P127 313 aa18.8■□□□□ 0.6
VCP-203ENST00000448530 ZNF282Q9UDV7 671 aaPredicted RBP18.8■□□□□ 0.6
VCP-203ENST00000448530 MDC1Q14676 2089 aaKnown RBP18.79■□□□□ 0.6
VCP-203ENST00000448530 TXNDC9O14530 226 aa18.79■□□□□ 0.6
VCP-203ENST00000448530 PRPF4O43172 522 aaKnown RBP eCLIP18.79■□□□□ 0.6
VCP-203ENST00000448530 SORBS2O94875 1100 aaKnown RBP18.79■□□□□ 0.6
VCP-203ENST00000448530 CARSP49589 748 aaKnown RBP18.79■□□□□ 0.6
VCP-203ENST00000448530 EMP3P54852 163 aa18.79■□□□□ 0.6
VCP-203ENST00000448530 DR1Q01658 176 aa18.79■□□□□ 0.6
VCP-203ENST00000448530 PRTGQ2VWP7 1150 aa18.79■□□□□ 0.6
VCP-203ENST00000448530 SLC6A19Q695T7 634 aa18.79■□□□□ 0.6
VCP-203ENST00000448530 CYHR1Q6ZMK1 362 aa18.79■□□□□ 0.6
VCP-203ENST00000448530 KIAA0408Q6ZU52 694 aa18.79■□□□□ 0.6
VCP-203ENST00000448530 RBMXL3Q8N7X1 1067 aaKnown RBP18.79■□□□□ 0.6
VCP-203ENST00000448530 GALNT11Q8NCW6 608 aa18.79■□□□□ 0.6
VCP-203ENST00000448530 MIEF2Q96C03 454 aa18.79■□□□□ 0.6
VCP-203ENST00000448530 CRB3Q9BUF7 120 aa18.79■□□□□ 0.6
VCP-203ENST00000448530 YIPF2Q9BWQ6 316 aa18.79■□□□□ 0.6
VCP-203ENST00000448530 PRRC2CQ9Y520 2896 aaKnown RBP18.79■□□□□ 0.6
VCP-203ENST00000448530 PTPN13Q12923 2485 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 PABPN1LA6NDY0 278 aaKnown RBP18.78■□□□□ 0.6
VCP-203ENST00000448530 BANF1O75531 89 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 C8GP07360 202 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 SOX8P57073 446 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 RELAQ04206 551 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 MORF4L2Q15014 288 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 INPP5JQ15735 1006 aaPredicted RBP18.78■□□□□ 0.6
VCP-203ENST00000448530 TUBB8Q3ZCM7 444 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 PRAMEF13Q5VWM6 474 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 ZNF425Q6IV72 752 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 TMEM151BQ8IW70 566 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 PRSS58Q8IYP2 241 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 MYO1HQ8N1T3 1032 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 ZADH2Q8N4Q0 377 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 DTWD1Q8N5C7 304 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 STT3BQ8TCJ2 826 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 MVB12AQ96EY5 273 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 CERS2Q96G23 380 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 C10orf90Q96M02 699 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 NAPGQ99747 312 aaPredicted RBP18.78■□□□□ 0.6
VCP-203ENST00000448530 CCDC177Q9NQR7 707 aaPredicted RBP18.78■□□□□ 0.6
VCP-203ENST00000448530 STOX2Q9P2F5 926 aaPredicted RBP18.78■□□□□ 0.6
VCP-203ENST00000448530 MAP4K5Q9Y4K4 846 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 HS3ST3B1Q9Y662 390 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 SAR1BQ9Y6B6 198 aa18.78■□□□□ 0.6
VCP-203ENST00000448530 IGKV1-8A0A0C4DH67 115 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 VSTM2BA6NLU5 285 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 USP27XA6NNY8 438 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 MASP2O00187 686 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 MED26O95402 600 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 ANXA5P08758 320 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 ZGLP1P0C6A0 271 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 HRH2P25021 359 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms