RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 VARSP26640 1264 aaKnown RBP18.81■□□□□ 0.6
SGCE-207ENST00000447873 HMOX2P30519 316 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 HNF4AP41235 474 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 CASP2P42575 452 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 CAPZBP47756 277 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 TBCCQ15814 346 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 CPSF6Q16630 551 aaKnown RBP eCLIP18.81■□□□□ 0.6
SGCE-207ENST00000447873 GGTA1PQ4G0N0 100 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 KANK2Q63ZY3 851 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 CGB2Q6NT52 195 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 PTCD3Q96EY7 689 aaKnown RBP18.81■□□□□ 0.6
SGCE-207ENST00000447873 AHCYL2Q96HN2 611 aaKnown RBP18.81■□□□□ 0.6
SGCE-207ENST00000447873 OR2A14Q96R47 310 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 TWSG1Q9GZX9 223 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 EHD1Q9H4M9 534 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 VTI1BQ9UEU0 232 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 HEATR5BQ9P2D3 2071 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 LY6G6EA0A0G2JKS1 128 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 CPED1A4D0V7 1026 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 H7BY64 318 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 CDX4O14627 284 aaPredicted RBP18.81■□□□□ 0.6
SGCE-207ENST00000447873 HDAC3O15379 428 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 FLRT2O43155 660 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 ZW10O43264 779 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 CHEK2O96017 543 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 JUPP14923 745 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 PNLIPP16233 465 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 UGT2B7P16662 529 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 SERPINB3P29508 390 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 CCR8P51685 355 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 OR1D5P58170 312 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 DAB2P98082 770 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 SF3A3Q12874 501 aaKnown RBP eCLIP18.81■□□□□ 0.6
SGCE-207ENST00000447873 NR1D2Q14995 579 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 PAGE2BQ5JRK9 111 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 DBX2Q6ZNG2 339 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 FAM20CQ8IXL6 584 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 CCDC74AQ96AQ1 378 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 WDR34Q96EX3 536 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 PRAP1Q96NZ9 151 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 ELAC2Q9BQ52 826 aaKnown RBP18.81■□□□□ 0.6
SGCE-207ENST00000447873 EFCAB11Q9BUY7 163 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 SLC29A3Q9BZD2 475 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 PELI2Q9HAT8 420 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 TMEM9BQ9NQ34 198 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 EVA1BQ9NVM1 165 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 CUEDC1Q9NWM3 386 aaPredicted RBP18.81■□□□□ 0.6
SGCE-207ENST00000447873 BTBD3Q9Y2F9 522 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 USH1CQ9Y6N9 552 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 U3KQA8 63 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 FFAR3O14843 346 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 GPR42O15529 346 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 CD22P20273 847 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 SLC14A1Q13336 389 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 LAPTM5Q13571 262 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 E2F2Q14209 437 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 PDCD2Q16342 344 aaPredicted RBP18.8■□□□□ 0.6
SGCE-207ENST00000447873 FAM219BQ5XKK7 198 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 GRHL2Q6ISB3 625 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 GUSBP11Q6P575 273 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 SPESP1Q6UW49 350 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 EFL1Q7Z2Z2 1120 aaKnown RBP18.8■□□□□ 0.6
SGCE-207ENST00000447873 ADCK2Q7Z695 626 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 HOMEZQ8IX15 550 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 Q8N9G6 341 aaPredicted RBP18.8■□□□□ 0.6
SGCE-207ENST00000447873 ABHD11Q8NFV4 315 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 FLVCR1-AS1Q8TAF5 88 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 NAT6Q93015 286 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 SIKE1Q9BRV8 207 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 EPB41L1Q9H4G0 881 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 RXFP3Q9NSD7 469 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 GEMIN8Q9NWZ8 242 aaKnown RBP18.8■□□□□ 0.6
SGCE-207ENST00000447873 KLHL14Q9P2G3 628 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 DCTN4Q9UJW0 460 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 DNAJC15Q9Y5T4 150 aa18.8■□□□□ 0.6
SGCE-207ENST00000447873 IGHV1OR21-1A0A087WYE8 117 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 EME2A4GXA9 379 aaPredicted RBP18.79■□□□□ 0.6
SGCE-207ENST00000447873 SKAP2O75563 359 aaPredicted RBP18.79■□□□□ 0.6
SGCE-207ENST00000447873 KRT6AP02538 564 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 KRT6BP04259 564 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 CKMT1AP12532 417 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 HRH2P25021 359 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 CXCR2P25025 360 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 KRT6CP48668 564 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 DUSP3P51452 185 aaPredicted RBP18.79■□□□□ 0.6
SGCE-207ENST00000447873 GPLD1P80108 840 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 MEF2AQ02078 507 aaPredicted RBP18.79■□□□□ 0.6
SGCE-207ENST00000447873 SLBPQ14493 270 aaKnown RBP eCLIP18.79■□□□□ 0.6
SGCE-207ENST00000447873 HIST2H2ACQ16777 129 aaPredicted RBP18.79■□□□□ 0.6
SGCE-207ENST00000447873 SLC5A12Q1EHB4 618 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 PROX2Q3B8N5 592 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 UGT3A2Q3SY77 523 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 AASDHQ4L235 1098 aaPredicted RBP18.79■□□□□ 0.6
SGCE-207ENST00000447873 NKAIN2Q5VXU1 208 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 KIAA1614Q5VZ46 1190 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 HIST2H2AA3Q6FI13 130 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 IRGCQ6NXR0 463 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 SPATA21Q7Z572 469 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 CHCHD4Q8N4Q1 142 aa18.79■□□□□ 0.6
SGCE-207ENST00000447873 RFWD2Q8NHY2 731 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms