RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SRSF11Q05519 484 aaKnown RBP18.52■□□□□ 0.56
SDCBP-204ENST00000447182 ZXDCQ2QGD7 858 aaPredicted RBP18.52■□□□□ 0.56
SDCBP-204ENST00000447182 VTCN1Q7Z7D3 282 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 PTOV1Q86YD1 416 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 RASAL3Q86YV0 1011 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 IFNL1Q8IU54 200 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 DCAF4L2Q8NA75 395 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 ATG16L2Q8NAA4 619 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 RPL3LQ92901 407 aaKnown RBP18.52■□□□□ 0.56
SDCBP-204ENST00000447182 SLC38A4Q969I6 547 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 ZHX1-C8orf76Q96EF9 292 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 ALG14Q96F25 216 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 HSH2DQ96JZ2 352 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 DACH2Q96NX9 599 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 CASD1Q96PB1 797 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 TTPALQ9BTX7 342 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 HERC2P3Q9BVR0 1158 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 ITPAQ9BY32 194 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 RNF38Q9H0F5 515 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 ELAC1Q9H777 363 aaKnown RBP18.52■□□□□ 0.56
SDCBP-204ENST00000447182 REEP1Q9H902 201 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 EFCAB9A8MZ26 197 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 FPGTO14772 594 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 CA12O43570 354 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 PCDHGA12O60330 932 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 SCN2BO60939 215 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 EPN2O95208 641 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 LRATO95237 230 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 RPP38P78345 283 aaKnown RBP18.52■□□□□ 0.55
SDCBP-204ENST00000447182 BCL2L1Q07817 233 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 VEZF1Q14119 521 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 IQCCQ4KMZ1 466 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 CATSPEREQ5SY80 951 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 NEK5Q6P3R8 708 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 TUBA3EQ6PEY2 450 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 PRSS55Q6UWB4 352 aaPredicted RBP18.52■□□□□ 0.55
SDCBP-204ENST00000447182 SLC22A16Q86VW1 577 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 FBXO22Q8NEZ5 403 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 APH1BQ8WW43 257 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 HRASLS5Q96KN8 279 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 PANX1Q96RD7 426 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 SLC12A9Q9BXP2 914 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 TM6SF2Q9BZW4 377 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 MMP27Q9H306 513 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 CPNE5Q9HCH3 593 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 PCDH12Q9NPG4 1184 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 THUMPD1Q9NXG2 353 aaKnown RBP18.52■□□□□ 0.55
SDCBP-204ENST00000447182 TRPM5Q9NZQ8 1165 aa18.52■□□□□ 0.55
SDCBP-204ENST00000447182 KIAA1522Q9P206 1035 aaPredicted RBP18.52■□□□□ 0.55
SDCBP-204ENST00000447182 C9P02748 559 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 LCKP06239 509 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 HOXD12P35452 270 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 SLC6A12P48065 614 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 ALDH7A1P49419 539 aaKnown RBP18.51■□□□□ 0.55
SDCBP-204ENST00000447182 PTPN5P54829 565 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 CAMK2GQ13555 558 aaPredicted RBP18.51■□□□□ 0.55
SDCBP-204ENST00000447182 NOXRED1Q6NXP6 359 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 TPGS1Q6ZTW0 290 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 TAS1R1Q7RTX1 841 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 SCAIQ8N9R8 606 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 HPS1Q92902 700 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 PYCR2Q96C36 320 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 APOLD1Q96LR9 279 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 EPYCQ99645 322 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 SYT17Q9BSW7 474 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 GABARAPL3Q9BY60 117 aa18.51■□□□□ 0.55
SDCBP-204ENST00000447182 REXO4Q9GZR2 422 aaKnown RBP18.51■□□□□ 0.55
SDCBP-204ENST00000447182 K7ERQ8 282 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 TAF4O00268 1085 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 ADAM12O43184 909 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 SOCS5O75159 536 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 C1QCP02747 245 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 CSKP41240 450 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 CSNK1DP48730 415 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 HNMTP50135 292 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 WNT3P56703 355 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 CREMQ03060 361 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 BCL2A1Q16548 175 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 SLC8B1Q6J4K2 584 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 AHSA2Q719I0 299 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 ARMC8Q8IUR7 673 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 ENTHD1Q8IYW4 607 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 MCFD2Q8NI22 146 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 EFHD2Q96C19 240 aaPredicted RBP18.5■□□□□ 0.55
SDCBP-204ENST00000447182 DCSTAMPQ9H295 470 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 RASSF1Q9NS23 344 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 SIRT5Q9NXA8 310 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 GABRQQ9UN88 632 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 UGT2A1Q9Y4X1 527 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 AP1M2Q9Y6Q5 423 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 A3GALT2U3KPV4 340 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 MAGEB17A8MXT2 336 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 SCAMP3O14828 347 aaKnown RBP18.5■□□□□ 0.55
SDCBP-204ENST00000447182 UPK1BO75841 260 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 LATS1O95835 1130 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 C8GP07360 202 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 MAPK8P45983 427 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 UGT8Q16880 541 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 MLIPQ5VWP3 458 aa18.5■□□□□ 0.55
SDCBP-204ENST00000447182 FRG2Q64ET8 278 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms