RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ATXN7O15265 892 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-204ENST00000446876 CREG1O75629 220 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 CCNDBP1O95273 360 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 MED26O95402 600 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 ACSL3O95573 720 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 STATHP02808 62 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 PRB1P04280 392 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 EIF2S1P05198 315 aaKnown RBP14.2□□□□□ -0.14
HDAC4-204ENST00000446876 CAPN1P07384 714 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 HBQ1P09105 142 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 HIST1H2AGP0C0S8 130 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-204ENST00000446876 HIST1H2ADP20671 130 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 GCGRP47871 477 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 FOXL2P58012 376 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 BMPR2Q13873 1038 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 LY6DQ14210 128 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 TSNQ15631 228 aaKnown RBP14.2□□□□□ -0.14
HDAC4-204ENST00000446876 PPP1R3AQ16821 1122 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 GRTP1Q5TC63 336 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 RHBDD2Q6NTF9 364 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 FBXO42Q6P3S6 717 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 CMC1Q7Z7K0 106 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 METTL27Q8N6F8 245 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-204ENST00000446876 HIST1H2AHQ96KK5 128 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 ZNF285Q96NJ3 590 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 GBP5Q96PP8 586 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 HIST1H2AJQ99878 128 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 ZFYVE21Q9BQ24 234 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 H2AFJQ9BTM1 129 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 NDC1Q9BTX1 674 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 POPDC3Q9HBV1 291 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 TXLNGQ9NUQ3 528 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 NDOR1Q9UHB4 597 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 KCND3Q9UK17 655 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 NFU1Q9UMS0 254 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 PCDHGA6Q9Y5G7 932 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 ATMQ13315 3056 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 CDC14CA4D256 554 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 PABPN1LA6NDY0 278 aaKnown RBP14.19□□□□□ -0.14
HDAC4-204ENST00000446876 H0YGG7 62 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 H7BY64 318 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 STMN1P16949 149 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 ITGAXP20702 1163 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 PTPN4P29074 926 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 SPRP35270 261 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-204ENST00000446876 AP1S2P56377 157 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 ARF3P61204 181 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-204ENST00000446876 RPS15P62841 145 aaKnown RBP14.19□□□□□ -0.14
HDAC4-204ENST00000446876 ABATP80404 500 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 IL10RAQ13651 578 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 ZKSCAN8Q15776 578 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-204ENST00000446876 UAP1Q16222 522 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-204ENST00000446876 DEFB109BQ30KR1 87 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 WASHC2DQ5SRD0 308 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 TTLL10Q6ZVT0 673 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 TMEM151BQ8IW70 566 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 UHMK1Q8TAS1 419 aaKnown RBP14.19□□□□□ -0.14
HDAC4-204ENST00000446876 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-204ENST00000446876 FBXL8Q96CD0 374 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 TSPAN17Q96FV3 270 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 PRAP1Q96NZ9 151 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 SGPP1Q9BX95 441 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 TRIM54Q9BYV2 358 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 FAM129AQ9BZQ8 928 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 SEMA4CQ9C0C4 833 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 CUTCQ9NTM9 273 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 ANKMY1Q9P2S6 941 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 CTNNAL1Q9UBT7 734 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 SRPK3Q9UPE1 567 aa14.19□□□□□ -0.14
HDAC4-204ENST00000446876 FARSAQ9Y285 508 aaKnown RBP14.19□□□□□ -0.14
HDAC4-204ENST00000446876 ENO2P09104 434 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-204ENST00000446876 FAM87AP0C7U9 286 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 CCDC166P0CW27 439 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 CDH1P12830 882 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 AGXTP21549 392 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 ALAS2P22557 587 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 PHBP35232 272 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 RAB10P61026 200 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 MC1RQ01726 317 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 NAB1Q13506 487 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 GRM7Q14831 915 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 NAA25Q14CX7 972 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 NCF4Q15080 339 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 C18orf21Q32NC0 220 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-204ENST00000446876 TCTE1Q5JU00 501 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 RELL1Q8IUW5 271 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 GSPT2Q8IYD1 628 aaKnown RBP14.18□□□□□ -0.14
HDAC4-204ENST00000446876 EXD3Q8N9H8 876 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 TTC29Q8NA56 475 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-204ENST00000446876 OR56A3Q8NH54 315 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 PROKR1Q8TCW9 393 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 SLC39A7Q92504 469 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 OR4K3Q96R72 315 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 GPR87Q9BY21 358 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 NLNQ9BYT8 704 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 DERL2Q9GZP9 239 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 ACSS3Q9H6R3 686 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 SLC22A11Q9NSA0 550 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 SNX7Q9UNH6 387 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 NOVA2Q9UNW9 492 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms