RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	CKAP5	Q14008	2032 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	SDHB	P21912	280 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	RPL9	P32969	192 aa	Known RBP	12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	PTGER1	P34995	402 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	FEN1	P39748	380 aa	Known RBP	12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	ST13	P50502	369 aa	Known RBP	12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	LRRC74A	Q0VAA2	488 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	SMARCB1	Q12824	385 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	PLD1	Q13393	1074 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	ATAD3B	Q5T9A4	648 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	AFMID	Q63HM1	303 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	SBSN	Q6UWP8	590 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	CCDC28A	Q8IWP9	274 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	AUTS2	Q8WXX7	1259 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	NELL1	Q92832	810 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	SCN3B	Q9NY72	215 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	DNMT3B	Q9UBC3	853 aa	Known RBP	12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	SNX6	Q9UNH7	406 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	SLC22A14	Q9Y267	594 aa		12.19	□□□□□ -0.46
DDR1-238	ENST00000446312	WDR47	O94967	919 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	STS	P08842	583 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	ENG	P17813	658 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	HOXC13	P31276	330 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	GRK5	P34947	590 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	SERPINB10	P48595	397 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	CHRNA6	Q15825	494 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	DGUOK	Q16854	277 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	SDE2	Q6IQ49	451 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	DNASE1L2	Q92874	299 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	MUL1	Q969V5	352 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	DOK1	Q99704	481 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	LINC00597	Q9H2U6	94 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	TMEM184C	Q9NVA4	438 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	RLIM	Q9NVW2	624 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	RAD51B	O15315	384 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	TBL1X	O60907	577 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	CD6	P30203	668 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	CLLU1OS	Q5K130	101 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	RTP2	Q5QGT7	225 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	SNAP47	Q5SQN1	464 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	SZRD1	Q7Z422	152 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	BCDIN3D	Q7Z5W3	292 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	HIPK1	Q86Z02	1210 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	ZNF683	Q8IZ20	524 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	OR4K1	Q8NGD4	311 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	PKMYT1	Q99640	499 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	ACPT	Q9BZG2	426 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	MOV10	Q9HCE1	1003 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	CTPS2	Q9NRF8	586 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	C1orf109	Q9NX04	203 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	PPT2	Q9UMR5	302 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312		H0YAE9	185 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312		H3BM21	787 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312		J3KTA2	159 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	MEN1	O00255	615 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	RGS14	O43566	566 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	RGS10	O43665	173 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	AIRE	O43918	545 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	UGT2B11	O75310	529 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	OTC	P00480	354 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	SLC19A1	P41440	591 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	TTPA	P49638	278 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	RPP38	P78345	283 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	GBX1	Q14549	363 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	OXA1L	Q15070	435 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	MED22	Q15528	200 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	SERPINA13P	Q6UXR4	307 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	TERB1	Q8NA31	727 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	ADAMTS16	Q8TE57	1224 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	ATL1	Q8WXF7	558 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	SH3KBP1	Q96B97	665 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	OTUB1	Q96FW1	271 aa	Predicted RBP	12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	MAP6	Q96JE9	813 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	HSH2D	Q96JZ2	352 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	SUSD3	Q96L08	255 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	IL4I1	Q96RQ9	567 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	PARK7	Q99497	189 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	TSEN34	Q9BSV6	310 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	BRINP2	Q9C0B6	783 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	ANKMY1	Q9P2S6	941 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312	NEUROG3	Q9Y4Z2	214 aa		12.18	□□□□□ -0.46
DDR1-238	ENST00000446312		A0A0U1RQF3	1178 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	OR2AG2	A6NM03	316 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	LRRTM2	O43300	516 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	PCDHGA12	O60330	932 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	TPST2	O60704	377 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	VPS4B	O75351	444 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	CKMT1A	P12532	417 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	OGN	P20774	298 aa	Known RBP	12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	IL32	P24001	234 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	RACK1	P63244	317 aa	Known RBP	12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	ABR	Q12979	859 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	EIF4EBP2	Q13542	120 aa	Predicted RBP	12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	KCNA10	Q16322	511 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	USP39	Q53GS9	565 aa	Known RBP	12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	DESI1	Q6ICB0	168 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	OR5K1	Q8NHB7	308 aa		12.17	□□□□□ -0.46
DDR1-238	ENST00000446312	PEX13	Q92968	403 aa		12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms