RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 FRMPD2BQ6IN97 320 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 ZNF425Q6IV72 752 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 AGTRAPQ6RW13 159 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 TTLL10Q6ZVT0 673 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 PAQR7Q86WK9 346 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 CCDC25Q86WR0 208 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 MMGT1Q8N4V1 131 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 NKAPQ8N5F7 415 aaKnown RBP17.83■□□□□ 0.44
CCDC188-202ENST00000444532 ANKRD7Q92527 254 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 VPS39Q96JC1 886 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 SMYD2Q9NRG4 433 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 STARD5Q9NSY2 213 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 CUTCQ9NTM9 273 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 IFT80Q9P2H3 777 aaPredicted RBP17.83■□□□□ 0.44
CCDC188-202ENST00000444532 TXNDC16Q9P2K2 825 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 MAN2B2Q9Y2E5 1009 aa17.83■□□□□ 0.44
CCDC188-202ENST00000444532 LOC105369274A0A096LPK9 316 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 LOC102723532A0A0G2JNH3 316 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 FAM159BA6NKW6 160 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 NRP2O60462 931 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 KLF7O75840 302 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-202ENST00000444532 ONECUT2O95948 504 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 ENO2P09104 434 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-202ENST00000444532 PIM1P11309 404 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-202ENST00000444532 EZRP15311 586 aaKnown RBP17.82■□□□□ 0.44
CCDC188-202ENST00000444532 ZNF37AP17032 561 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-202ENST00000444532 SAT1P21673 171 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 PGGT1BP53609 377 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 GPX6P59796 221 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 POU4F1Q01851 419 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 IL10RAQ13651 578 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 PHKG1Q16816 387 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 APLFQ8IW19 511 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-202ENST00000444532 OR4N4Q8N0Y3 316 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 ADAMTS17Q8TE56 1095 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 CPNE1Q99829 537 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 SLC25A18Q9H1K4 315 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 POPDC3Q9HBV1 291 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 ABCF3Q9NUQ8 709 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 NDOR1Q9UHB4 597 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 NOVA2Q9UNW9 492 aaKnown RBP17.82■□□□□ 0.44
CCDC188-202ENST00000444532 ANKRD12Q6UB98 2062 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 CFAP46Q8IYW2 2715 aa17.82■□□□□ 0.44
CCDC188-202ENST00000444532 HYKKA2RU49 373 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 CXorf49A8MYA2 514 aaPredicted RBP17.81■□□□□ 0.44
CCDC188-202ENST00000444532 H0YGG7 62 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 PMS2P54278 862 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 EMP3P54852 163 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 SLC12A2P55011 1212 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 TAS2R39P59534 338 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 ARF3P61204 181 aaPredicted RBP17.81■□□□□ 0.44
CCDC188-202ENST00000444532 TBPL1P62380 186 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 NFKB2Q00653 900 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 PRAMEF13Q5VWM6 474 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 TMEM207Q6UWW9 146 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 ATL1Q8WXF7 558 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 FAM129AQ9BZQ8 928 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 LRRC4CQ9HCJ2 640 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 TMEM184CQ9NVA4 438 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 ARL15Q9NXU5 204 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 COL6A6A6NMZ7 2263 aa17.81■□□□□ 0.44
CCDC188-202ENST00000444532 MDC1Q14676 2089 aaKnown RBP17.8■□□□□ 0.44
CCDC188-202ENST00000444532 ESYT3A0FGR9 886 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 B8ZZF3 427 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 TXNDC9O14530 226 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 PIAS1O75925 651 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 C1QAP02745 245 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 ALBP02768 609 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 EIF2S1P05198 315 aaKnown RBP17.8■□□□□ 0.44
CCDC188-202ENST00000444532 GUCY2DQ02846 1103 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 NAE1Q13564 534 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 SSPNQ14714 243 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 GLE1Q53GS7 698 aaKnown RBP17.8■□□□□ 0.44
CCDC188-202ENST00000444532 MRPL14Q6P1L8 145 aaKnown RBP17.8■□□□□ 0.44
CCDC188-202ENST00000444532 MBOAT1Q6ZNC8 495 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 OVCH1Q7RTY7 1134 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 ADCK2Q7Z695 626 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 CEP97Q8IW35 865 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 KIF18AQ8NI77 898 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 RERGQ96A58 199 aaPredicted RBP17.8■□□□□ 0.44
CCDC188-202ENST00000444532 FKBP10Q96AY3 582 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 TSPAN17Q96FV3 270 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 OR2A5Q96R48 311 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 SGPP1Q9BX95 441 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 ATG10Q9H0Y0 220 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 ZDHHC18Q9NUE0 388 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 MTO1Q9Y2Z2 717 aaKnown RBP17.8■□□□□ 0.44
CCDC188-202ENST00000444532 CCDC88CQ9P219 2028 aa17.8■□□□□ 0.44
CCDC188-202ENST00000444532 SMG1Q96Q15 3661 aaKnown RBP17.79■□□□□ 0.44
CCDC188-202ENST00000444532 CTAGE15A4D2H0 777 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 MKRN2OSH3BPM6 223 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 H7BY64 318 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 RFPL1O75677 317 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 CTAGE8P0CG41 777 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 ITGAXP20702 1163 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 STX2P32856 288 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 GP5P40197 560 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 NFATC3Q12968 1075 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 MUM1Q2TAK8 710 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 PRTGQ2VWP7 1150 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms