RNA–Protein interactions for RNA: ENST00000443878.1

RAB5A-204, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-204ENST00000443878 G3BP2Q9UN86 482 aaKnown RBP20.14■□□□□ 0.81
RAB5A-204ENST00000443878 PTRH2Q9Y3E5 179 aaKnown RBP20.14■□□□□ 0.81
RAB5A-204ENST00000443878 ARGFXA6NJG6 315 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 FDXRP22570 491 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 CCND1P24385 295 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 NFKB2Q00653 900 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 CAV1Q03135 178 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 CKAP4Q07065 602 aaKnown RBP20.13■□□□□ 0.81
RAB5A-204ENST00000443878 DUPD1Q68J44 220 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 FRMPD2BQ6IN97 320 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 ZNF425Q6IV72 752 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 FBXO42Q6P3S6 717 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 ZNF572Q7Z3I7 529 aaPredicted RBP20.13■□□□□ 0.81
RAB5A-204ENST00000443878 PAQR7Q86WK9 346 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 LRRC56Q8IYG6 542 aaPredicted RBP20.13■□□□□ 0.81
RAB5A-204ENST00000443878 NACC2Q96BF6 587 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 PTERQ96BW5 349 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 TRIM54Q9BYV2 358 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 PHACTR1Q9C0D0 580 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 DPH5Q9H2P9 285 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 WDR54Q9H977 334 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 STOX2Q9P2F5 926 aaPredicted RBP20.13■□□□□ 0.81
RAB5A-204ENST00000443878 SLC17A6Q9P2U8 582 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 NXT1Q9UKK6 140 aaKnown RBP20.13■□□□□ 0.81
RAB5A-204ENST00000443878 PDE10AQ9Y233 779 aa20.13■□□□□ 0.81
RAB5A-204ENST00000443878 PCDHGA9Q9Y5G4 932 aaKnown RBP20.13■□□□□ 0.81
RAB5A-204ENST00000443878 HEATR5BQ9P2D3 2071 aa20.12■□□□□ 0.81
RAB5A-204ENST00000443878 HYKKA2RU49 373 aa20.12■□□□□ 0.81
RAB5A-204ENST00000443878 TXNDC9O14530 226 aa20.12■□□□□ 0.81
RAB5A-204ENST00000443878 AP1S2P56377 157 aa20.12■□□□□ 0.81
RAB5A-204ENST00000443878 FASTKD3Q14CZ7 662 aaKnown RBP20.12■□□□□ 0.81
RAB5A-204ENST00000443878 MUM1Q2TAK8 710 aa20.12■□□□□ 0.81
RAB5A-204ENST00000443878 PRMT9Q6P2P2 845 aa20.12■□□□□ 0.81
RAB5A-204ENST00000443878 OVCH1Q7RTY7 1134 aa20.12■□□□□ 0.81
RAB5A-204ENST00000443878 RERGQ96A58 199 aaPredicted RBP20.12■□□□□ 0.81
RAB5A-204ENST00000443878 SLC26A1Q9H2B4 701 aa20.12■□□□□ 0.81
RAB5A-204ENST00000443878 TP53TG5Q9Y2B4 290 aa20.12■□□□□ 0.81
RAB5A-204ENST00000443878 LOC105369274A0A096LPK9 316 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 IGKV1-8A0A0C4DH67 115 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 LOC102723532A0A0G2JNH3 316 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 H0YGG7 62 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 PEX12O00623 359 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 EIF2S1P05198 315 aaKnown RBP20.11■□□□□ 0.81
RAB5A-204ENST00000443878 OTX2P32243 289 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 ARF3P61204 181 aaPredicted RBP20.11■□□□□ 0.81
RAB5A-204ENST00000443878 YBX1P67809 324 aaKnown RBP20.11■□□□□ 0.81
RAB5A-204ENST00000443878 MRPS25P82663 173 aaKnown RBP20.11■□□□□ 0.81
RAB5A-204ENST00000443878 SLC9A5Q14940 896 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 PRAMEF13Q5VWM6 474 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 ADCK2Q7Z695 626 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 STRA8Q7Z7C7 330 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 ZC3HC1Q86WB0 502 aaKnown RBP20.11■□□□□ 0.81
RAB5A-204ENST00000443878 PTRH1Q86Y79 214 aaKnown RBP20.11■□□□□ 0.81
RAB5A-204ENST00000443878 OR4N4Q8N0Y3 316 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 CDKL2Q92772 493 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 MVB12AQ96EY5 273 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 PDLIM5Q96HC4 596 aaKnown RBP20.11■□□□□ 0.81
RAB5A-204ENST00000443878 FER1L6-AS2Q96M78 137 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 SLC25A23Q9BV35 468 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 TRIM55Q9BYV6 548 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 SAYSD1Q9NPB0 183 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 SLC22A11Q9NSA0 550 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 TMEM184CQ9NVA4 438 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 ADAMTS6Q9UKP5 1117 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 PCDHGB7Q9Y5F8 929 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 BAHCC1Q9P281 2608 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 BOD1L1Q8NFC6 3051 aa20.11■□□□□ 0.81
RAB5A-204ENST00000443878 PRPF4O43172 522 aaKnown RBP eCLIP20.1■□□□□ 0.813e-6■■■□□ 16.6
RAB5A-204ENST00000443878 TSPAN12O95859 305 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 ENO2P09104 434 aaPredicted RBP20.1■□□□□ 0.81
RAB5A-204ENST00000443878 GSTA2P09210 222 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 CCL11P51671 97 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 TBPL1P62380 186 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 KLRB1Q12918 225 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 PRTGQ2VWP7 1150 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 FAM69BQ5VUD6 431 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 GARNL3Q5VVW2 1013 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 CPZQ66K79 652 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 AGTRAPQ6RW13 159 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 ASB18Q6ZVZ8 466 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 CYS1Q717R9 158 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 MRGPREQ86SM8 312 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 NKAPQ8N5F7 415 aaKnown RBP20.1■□□□□ 0.81
RAB5A-204ENST00000443878 ATL1Q8WXF7 558 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 ANKRD7Q92527 254 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 VPS39Q96JC1 886 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 OLFM1Q99784 485 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 ABCF3Q9NUQ8 709 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 GRHL1Q9NZI5 618 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 CDC14AQ9UNH5 594 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 ANKRD12Q6UB98 2062 aa20.1■□□□□ 0.81
RAB5A-204ENST00000443878 CCDC88CQ9P219 2028 aa20.09■□□□□ 0.81
RAB5A-204ENST00000443878 NRP2O60462 931 aa20.09■□□□□ 0.81
RAB5A-204ENST00000443878 KLHL41O60662 606 aa20.09■□□□□ 0.81
RAB5A-204ENST00000443878 DNAJB5O75953 348 aa20.09■□□□□ 0.81
RAB5A-204ENST00000443878 ITGAXP20702 1163 aa20.09■□□□□ 0.81
RAB5A-204ENST00000443878 ATP1A4Q13733 1029 aa20.09■□□□□ 0.81
RAB5A-204ENST00000443878 SPNS2Q8IVW8 549 aa20.09■□□□□ 0.81
RAB5A-204ENST00000443878 CSNK1A1LQ8N752 337 aa20.09■□□□□ 0.81
RAB5A-204ENST00000443878 THAP11Q96EK4 314 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms