RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 HIST1H2AHQ96KK5 128 aa18.39■□□□□ 0.54
PAXBP1-204ENST00000443785 SPATA17Q96L03 361 aa18.39■□□□□ 0.54
PAXBP1-204ENST00000443785 HIST1H2AJQ99878 128 aa18.39■□□□□ 0.54
PAXBP1-204ENST00000443785 H2AFJQ9BTM1 129 aa18.39■□□□□ 0.54
PAXBP1-204ENST00000443785 MAGEE1Q9HCI5 957 aa18.39■□□□□ 0.54
PAXBP1-204ENST00000443785 RLIMQ9NVW2 624 aa18.39■□□□□ 0.54
PAXBP1-204ENST00000443785 RIMKLBQ9ULI2 386 aa18.39■□□□□ 0.54
PAXBP1-204ENST00000443785 YIPF1Q9Y548 306 aa18.39■□□□□ 0.54
PAXBP1-204ENST00000443785 FZD6O60353 706 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 INAVAQ3KP66 663 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 XKR6Q5GH73 641 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 KLHL17Q6TDP4 642 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 SLC22A16Q86VW1 577 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 RAVER1Q8IY67 606 aaKnown RBP18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 CADM3Q8N126 398 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 CHST14Q8NCH0 376 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 COPS8Q99627 209 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 ABCB8Q9NUT2 735 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 TBX1O43435 398 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 PCDHGA12O60330 932 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 ETHE1O95571 254 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 POU1F1P28069 291 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 RPP38P78345 283 aaKnown RBP18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 IRF8Q02556 426 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 LMAN2Q12907 356 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 BTG3Q14201 252 aaPredicted RBP18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 FXNQ16595 210 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 NOXRED1Q6NXP6 359 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 ZNF852Q6ZMS4 543 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 HMGN2P46Q86SG4 172 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 ZNF641Q96N77 438 aaPredicted RBP18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 SAMD11Q96NU1 681 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 TUBA1CQ9BQE3 449 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 KLF16Q9BXK1 252 aaPredicted RBP18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 KIAA1522Q9P206 1035 aaPredicted RBP18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 CFAP97Q9P2B7 532 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 MYO15AQ9UKN7 3530 aa18.39■□□□□ 0.53
PAXBP1-204ENST00000443785 A0A1W2PQ45 241 aaPredicted RBP18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 A0A1W2PQY0 241 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 TMEM189-UBE2V1I3L0A0 370 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 J3KTA2 159 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 UGT2B11O75310 529 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 NPPAP01160 153 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 EBLN1P0CF75 366 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 ZNF12P17014 697 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 SPAM1P38567 509 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 CHPT1Q8WUD6 406 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 DNASE1L2Q92874 299 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 SLC32A1Q9H598 525 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 GPN2Q9H9Y4 310 aaPredicted RBP18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 THUMPD1Q9NXG2 353 aaKnown RBP18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 TMEM9Q9P0T7 183 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 E7EQ34 232 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 FAM227AF5H4B4 570 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 RFXAPO00287 272 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 PPP3CCP48454 512 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 TMED10P49755 219 aaKnown RBP18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 ARHGDIAP52565 204 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 RPS3AP61247 264 aaKnown RBP18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 GANABQ14697 944 aaKnown RBP18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 Q6ZVU0 165 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 SYTL1Q8IYJ3 562 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 SNX8Q9Y5X2 465 aa18.38■□□□□ 0.53
PAXBP1-204ENST00000443785 GNG14A0A1W2PPG7 69 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 CD22P20273 847 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 RRM2P31350 389 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 CRATP43155 626 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 NAE1Q13564 534 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 CERS6Q6ZMG9 384 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 C11orf74Q86VG3 221 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 SH3GL1Q99961 368 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 HEPHQ9BQS7 1158 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 YTHDF1Q9BYJ9 559 aaKnown RBP18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 RAD18Q9NS91 495 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 SCN4AP35499 1836 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 IGHA2P01877 340 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 FABP3P05413 133 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 JUNBP17275 347 aaPredicted RBP18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 HOXA9P31269 272 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 MC1RQ01726 317 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 UGT8Q16880 541 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 SVOPLQ8N434 492 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 TRIM39Q9HCM9 518 aa18.37■□□□□ 0.53
PAXBP1-204ENST00000443785 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 PTPN6P29350 595 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 LIPAP38571 399 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 BDKRB1P46663 353 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 TUFMP49411 452 aaKnown RBP18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 PTSQ03393 145 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 GTPBP3Q969Y2 492 aaKnown RBP18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 CCDC115Q96NT0 180 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 DACH2Q96NX9 599 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 ZNF347Q96SE7 839 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 RMND5AQ9H871 391 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 SCN3BQ9NY72 215 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 H7C0S8 307 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 PCDH7O60245 1069 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 AOC2O75106 756 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 KCNK5O95279 499 aa18.36■□□□□ 0.53
PAXBP1-204ENST00000443785 GABRR2P28476 465 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms