RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 AQP12AQ8IXF9 295 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 BHLHE22Q8NFJ8 381 aaPredicted RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 OR8J3Q8NGG0 315 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 CDC26Q8NHZ8 85 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 CAMK1GQ96NX5 476 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 OR52E6Q96RD3 313 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ECSITQ9BQ95 431 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 INTS7Q9NVH2 962 aaKnown RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 MAGEL2Q9UJ55 1249 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PPT2Q9UMR5 302 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PRKAB1Q9Y478 270 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PCDHB11Q9Y5F2 797 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 SNX13Q9Y5W8 968 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PIKFYVEQ9Y2I7 2098 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PRSS38A1L453 326 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 CHURC1-FNTBB4DL54 471 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 RASGRP1O95267 797 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 TNFP01375 233 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 C7P10643 843 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 COX7A2P14406 83 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 ACADSP16219 412 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 AMD1P17707 334 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 EPORP19235 508 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 CMPK1P30085 196 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 SHMT2P34897 504 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 KIR3DL1P43629 444 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 GSTM5P46439 218 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 RAB28P51157 221 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 HNRNPFP52597 415 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 CCNIQ14094 377 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 RBBP5Q15291 538 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 USP39Q53GS9 565 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 NATD1Q8N6N6 113 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 AVL9Q8NBF6 648 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 OR7G3Q8NG95 312 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 OR5AR1Q8NGP9 310 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 HMGCLL1Q8TB92 370 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 PROKR1Q8TCW9 393 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 DNAJC9Q8WXX5 260 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 TESCQ96BS2 214 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 CGREF1Q99674 301 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 MYOCQ99972 504 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 PRO3102Q9H379 93 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 SPATA6Q9NWH7 488 aaPredicted RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 FAM120CQ9NX05 1096 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 SUFUQ9UMX1 484 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 PCDHGB4Q9UN71 923 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 CORO2BQ9UQ03 480 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 KCNK6Q9Y257 313 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 CCL27Q9Y4X3 112 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 CKAP5Q14008 2032 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 A0A096LPI6 279 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 GNG14A0A1W2PPG7 69 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 PIPSLA2A3N6 862 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 NDUFS2O75306 463 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 SEMA3DO95025 777 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 CEACAM5P06731 702 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 UMPSP11172 480 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 GABRG2P18507 467 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 TCN1P20061 433 aaPredicted RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 TIA1P31483 386 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS50-205ENST00000441602 PTDSS1P48651 473 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 BLKP51451 505 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 TPMTP51580 245 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 NEK2P51955 445 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 FGL2Q14314 439 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 CCDC85BQ15834 202 aaPredicted RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 PGS1Q32NB8 556 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 FAM174BQ3ZCQ3 159 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 CCSMST1Q4G0I0 132 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 IRAK1BP1Q5VVH5 260 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 PTCRAQ6ISU1 281 aaPredicted RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 TMIGD1Q6UXZ0 262 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 WASH2PQ6VEQ5 465 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 SYT13Q7L8C5 426 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 ADCK2Q7Z695 626 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 DCP2Q8IU60 420 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 LAS2Q8IYD9 372 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 OR2L8Q8NGY9 312 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 VPS33AQ96AX1 596 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 SLC22A18Q96BI1 424 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 TSSK3Q96PN8 268 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 GPATCH1Q9BRR8 931 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 GSDMCQ9BYG8 508 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 PCED1AQ9H1Q7 454 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 KCNH6Q9H252 994 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 RAD21L1Q9H4I0 556 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 CLMPQ9H6B4 373 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 EBF2Q9HAK2 575 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 WASH6PQ9NQA3 447 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 FARSBQ9NSD9 589 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 ABCD2Q9UBJ2 740 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 OR5K4A6NMS3 321 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 GUCY1B2O75343 617 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 PGRP06401 933 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 GPIP06744 558 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 ASGR2P07307 311 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 ANXA4P09525 319 aaPredicted RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 MTHFD1P11586 935 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 CDH1P12830 882 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms