RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ADAM23O75077 832 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 GMNNO75496 209 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 HOXC4P09017 264 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 C1GALT1C1LP0DN25 315 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 UMPSP11172 480 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 PCNAP12004 261 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 POU3F3P20264 500 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 RPL3P39023 403 aaKnown RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 GRIA3P42263 894 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 KIR3DL1P43629 444 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 NEK2P51955 445 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 DGKQP52824 942 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 MRPS35P82673 323 aaKnown RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 CTBSQ01459 385 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 SRSF11Q05519 484 aaKnown RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 LRRC74AQ0VAA2 488 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 MTAPQ13126 283 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 DDX39BQ13838 428 aaKnown RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 LRIF1Q5T3J3 769 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 METRNLQ641Q3 311 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 NXPE4Q6UWF7 544 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 CYP2R1Q6VVX0 501 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 TBC1D21Q8IYX1 336 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 KRT78Q8N1N4 520 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 OR7G3Q8NG95 312 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 GTF2H4Q92759 462 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 ERLEC1Q96DZ1 483 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 SIPA1Q96FS4 1042 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 TSSK3Q96PN8 268 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 HHIPQ96QV1 700 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 OR52E6Q96RD3 313 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 NR1H4Q96RI1 486 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 SLC17A9Q9BYT1 436 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 PITHD1Q9GZP4 211 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 KCNH6Q9H252 994 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 COPS7BQ9H9Q2 264 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 DMRT3Q9NQL9 472 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 C8orf4Q9NR00 106 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 MBNL1Q9NR56 388 aaKnown RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 SIRT5Q9NXA8 310 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 ADGRE2Q9UHX3 823 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 CNOT11Q9UKZ1 510 aaKnown RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 SLC17A4Q9Y2C5 497 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 CHD9Q3L8U1 2897 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 CHD7Q9P2D1 2997 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 FAM220BPB1ANY3 271 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 HNRNPRO43390 633 aaKnown RBP12.72□□□□□ -0.37
CPSF4-206ENST00000441580 CAPNS1P04632 268 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 ACADMP11310 421 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 HOXB6P17509 224 aaKnown RBP12.72□□□□□ -0.37
CPSF4-206ENST00000441580 COL9A1P20849 921 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 IL10P22301 178 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 CXCR2P25025 360 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 TIA1P31483 386 aaKnown RBP eCLIP12.72□□□□□ -0.37
CPSF4-206ENST00000441580 PIK3CBP42338 1070 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 KLC1Q07866 573 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 CYP4F3Q08477 520 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 SMAD4Q13485 552 aaKnown RBP12.72□□□□□ -0.37
CPSF4-206ENST00000441580 TSTA3Q13630 321 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-206ENST00000441580 FGL2Q14314 439 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 THEMIS2Q5TEJ8 643 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 LPCAT4Q643R3 524 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 ERMP1Q7Z2K6 904 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 GPR180Q86V85 440 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 TRIM69Q86WT6 500 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 RIMKLAQ8IXN7 391 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 KRTCAP2Q8N6L1 136 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 OR5AR1Q8NGP9 310 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 CLHC1Q8NHS4 586 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 HUS1BQ8NHY5 278 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 SMPDL3AQ92484 453 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 PPM1MQ96MI6 270 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 MTERF1Q99551 399 aaKnown RBP12.72□□□□□ -0.37
CPSF4-206ENST00000441580 PKP2Q99959 881 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 LGR4Q9BXB1 951 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 PRM3Q9NNZ6 103 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 CCM2LQ9NUG4 571 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-206ENST00000441580 NEUROG3Q9Y4Z2 214 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 OR1A2Q9Y585 309 aa12.72□□□□□ -0.37
CPSF4-206ENST00000441580 TRBV5-3A0A0A0MS03 114 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 MAGEB17A8MXT2 336 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 C2CD4DB7Z1M9 353 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 H0YJX3 145 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 SCAMP2O15127 329 aaKnown RBP12.71□□□□□ -0.37
CPSF4-206ENST00000441580 ACP5P13686 325 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 COX7A2P14406 83 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 NPPBP16860 134 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 TRPC1P48995 793 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 AQP4P55087 323 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 POLE2P56282 527 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 MTPNP58546 118 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 TBCELQ5QJ74 424 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 GALNT18Q6P9A2 607 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 DNAJC14Q6Y2X3 702 aaPredicted RBP12.71□□□□□ -0.37
CPSF4-206ENST00000441580 CAMKMTQ7Z624 323 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 C17orf64Q86WR6 236 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 TICAM1Q8IUC6 712 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 TMEM102Q8N9M5 508 aaPredicted RBP12.71□□□□□ -0.37
CPSF4-206ENST00000441580 OR2T12Q8NG77 320 aa12.71□□□□□ -0.37
CPSF4-206ENST00000441580 N4BP2L2Q92802 583 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms