RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 GCGRP47871 477 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 ARL4CP56559 192 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 YBX1P67809 324 aaKnown RBP18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 OCA2Q04671 838 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 RBBP7Q16576 425 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 NADK2Q4G0N4 442 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 MSS51Q4VC12 460 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 VWA5B1Q5TIE3 1220 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 PAPD7Q5XG87 772 aaKnown RBP18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 SHISA6Q6ZSJ9 500 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 KIAA0408Q6ZU52 694 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 PPP1R32Q7Z5V6 425 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 HPS6Q86YV9 775 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 CSNK1A1LQ8N752 337 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 FBXO15Q8NCQ5 510 aaPredicted RBP18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 MCOLN3Q8TDD5 553 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 SNF8Q96H20 258 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 PLCD4Q9BRC7 762 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 TRIM51Q9BSJ1 452 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 YIPF2Q9BWQ6 316 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 MFRPQ9BY79 579 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 ZNF304Q9HCX3 659 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 MLXIPLQ9NP71 852 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 CCDC177Q9NQR7 707 aaPredicted RBP18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 SLC22A11Q9NSA0 550 aa18.97■□□□□ 0.63
SHROOM1-204ENST00000440118 H0YGG7 62 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 CCDC188H7C350 402 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 PRPF4O43172 522 aaKnown RBP eCLIP18.96■□□□□ 0.634e-7■■■□□ 17.2
SHROOM1-204ENST00000440118 C8GP07360 202 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 UMODP07911 640 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 EZRP15311 586 aaKnown RBP18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 FBLP22087 321 aaKnown RBP18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 ITGA3P26006 1051 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 ELK3P41970 407 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 SKIV2L2P42285 1042 aaKnown RBP18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 ARF3P61204 181 aaPredicted RBP18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 ABATP80404 500 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 PRDX1Q06830 199 aaKnown RBP18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 PDAP1Q13442 181 aaKnown RBP18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 NKG7Q16617 165 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 PRMT9Q6P2P2 845 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 CREG2Q8IUH2 290 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 GALNT16Q8N428 558 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 GPATCH11Q8N954 259 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 LINGO1Q96FE5 620 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 CRB3Q9BUF7 120 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 SLAMF7Q9NQ25 335 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 LUZP4Q9P127 313 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 FBXL4Q9UKA2 621 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 FLNCQ14315 2725 aa18.96■□□□□ 0.63
SHROOM1-204ENST00000440118 E7ENX8 843 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 GFYI3L273 518 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 AGPSO00116 658 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 TTI1O43156 1089 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 ANXA5P08758 320 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 HIST1H2AGP0C0S8 130 aaPredicted RBP18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 HIST1H2ADP20671 130 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 MMP11P24347 488 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 ITGA8P53708 1063 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 TBPL1P62380 186 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 TAP2Q03519 686 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 SP140Q13342 867 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 RBM20Q5T481 1227 aaKnown RBP18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 COX15Q7KZN9 410 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 PAQR7Q86WK9 346 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 SPNS2Q8IVW8 549 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 PRSS58Q8IYP2 241 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 DTWD1Q8N5C7 304 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 CPT1CQ8TCG5 803 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 TM9SF4Q92544 642 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 ALKBH8Q96BT7 664 aaKnown RBP18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 MIEF2Q96C03 454 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 HIST1H2AHQ96KK5 128 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 HIST1H2AJQ99878 128 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 H2AFJQ9BTM1 129 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 SLC26A1Q9H2B4 701 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 ATP13A2Q9NQ11 1180 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 STOX2Q9P2F5 926 aaPredicted RBP18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 SLC17A6Q9P2U8 582 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 ZNF282Q9UDV7 671 aaPredicted RBP18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 PYCARDQ9ULZ3 195 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 CDC14AQ9UNH5 594 aa18.95■□□□□ 0.62
SHROOM1-204ENST00000440118 TXNDC9O14530 226 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 NDC80O14777 642 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 VPS4BO75351 444 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 IPO13O94829 963 aaKnown RBP18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 IMPA1P29218 277 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 MYBPC3Q14896 1274 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 PRAMEF13Q5VWM6 474 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 CNTN4Q8IWV2 1026 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 EEF1AKMT1Q8WVE0 214 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 MIB2Q96AX9 1013 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 LRRC39Q96DD0 335 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 PDLIM2Q96JY6 352 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 SPSB2Q99619 263 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 SMAD5Q99717 465 aaKnown RBP18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 SEMA3GQ9NS98 782 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 VPS4AQ9UN37 437 aa18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 RUVBL1Q9Y265 456 aaKnown RBP18.94■□□□□ 0.62
SHROOM1-204ENST00000440118 HECTD1Q9ULT8 2610 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms