RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SYT11Q9BT88 431 aa2.54□□□□□ -2
HMGB1P18-201ENST00000438801 SIL1Q9H173 461 aa2.54□□□□□ -2
HMGB1P18-201ENST00000438801 TMEM245Q9H330 911 aa2.54□□□□□ -2
HMGB1P18-201ENST00000438801 PRKRIP1Q9H875 184 aaPredicted RBP2.54□□□□□ -2
HMGB1P18-201ENST00000438801 FN3KRPQ9HA64 309 aa2.54□□□□□ -2
HMGB1P18-201ENST00000438801 ATAD3AQ9NVI7 634 aa2.54□□□□□ -2
HMGB1P18-201ENST00000438801 STK39Q9UEW8 545 aa2.54□□□□□ -2
HMGB1P18-201ENST00000438801 SARDHQ9UL12 918 aa2.54□□□□□ -2
HMGB1P18-201ENST00000438801 TBX20Q9UMR3 447 aa2.54□□□□□ -2
HMGB1P18-201ENST00000438801 EXOGQ9Y2C4 368 aaKnown RBP2.54□□□□□ -2
HMGB1P18-201ENST00000438801 RPH3AQ9Y2J0 694 aaPredicted RBP2.54□□□□□ -2
HMGB1P18-201ENST00000438801 ZHX2Q9Y6X8 837 aa2.54□□□□□ -2
HMGB1P18-201ENST00000438801 KNL1Q8NG31 2342 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 BAZ2BQ9UIF8 2168 aaKnown RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 MAGEB17A8MXT2 336 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 CLPTM1O96005 669 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 LIPFP07098 398 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 KRT19P08727 400 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 PRB4P10163 310 aaPredicted RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 LIFP15018 202 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 GATA1P15976 413 aaPredicted RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 ITGA3P26006 1051 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 ARL1P40616 181 aaPredicted RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 RPS9P46781 194 aaKnown RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 PIP4K2AP48426 406 aaPredicted RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 IRX4P78413 519 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 GALNT2Q10471 571 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 CDC16Q13042 620 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 SLC39A6Q13433 755 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 OLIG2Q13516 323 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 PDE1CQ14123 709 aaPredicted RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 PRICKLE4Q2TBC4 344 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 LINC00303Q3SY05 128 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 ZNF613Q6PF04 617 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 GSTA5Q7RTV2 222 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 ANKRD18AQ8IVF6 992 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 MYOCDQ8IZQ8 938 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 BMPERQ8N8U9 685 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 OR1J2Q8NGS2 313 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 ZNF564Q8TBZ8 553 aaPredicted RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 MRGPRDQ8TDS7 321 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 PPP4R1Q8TF05 950 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 SNRNP27Q8WVK2 155 aaKnown RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 PSPC1Q8WXF1 523 aaKnown RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 CLDN23Q96B33 292 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 HDAC11Q96DB2 347 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 MAELQ96JY0 434 aaKnown RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 SLX1AQ9BQ83 275 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 CCDC177Q9NQR7 707 aaPredicted RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 ZNF71Q9NQZ8 489 aaPredicted RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 KLHL8Q9P2G9 620 aaPredicted RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 DNAJB4Q9UDY4 337 aa2.53□□□□□ -2
HMGB1P18-201ENST00000438801 INTS6Q9UL03 887 aaKnown RBP2.53□□□□□ -2
HMGB1P18-201ENST00000438801 ANKRD36CQ5JPF3 1778 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 C1orf226A1L170 272 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 HEATR9A2RTY3 570 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 SLC15A5A6NIM6 579 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 C15orf62A8K5M9 175 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 C5orf67F2Z3F1 127 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 SLCO1B7G3V0H7 640 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 ZFAND5O76080 213 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 EML2O95834 649 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 TPOP07202 933 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 HMBSP08397 361 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 IQCF3P0C7M6 154 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 FAM157CP0CG43 387 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 ANXA7P20073 488 aaKnown RBP2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 ACTN2P35609 894 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 PAFAH1B1P43034 410 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 CXCL12P48061 93 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 ATXN3P54252 364 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 SLC8A3P57103 927 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 SNRPD1P62314 119 aaKnown RBP2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 IRX3P78415 501 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 PPP2R2BQ00005 443 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 PPARDQ03181 441 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 MLF2Q15773 248 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 TAF12Q16514 161 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 BAK1Q16611 211 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 UGP2Q16851 508 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 CDONQ4KMG0 1287 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 RAB6CQ53S08 254 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 ALS2CLQ60I27 953 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 NSUN5P2Q63ZY6 315 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 PM20D2Q8IYS1 436 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 SCML4Q8N228 414 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 PAF1Q8N7H5 531 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 ZNF614Q8N883 585 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 AMER3Q8N944 861 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 GRHL3Q8TE85 626 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 C18orf12Q96KH6 178 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 SEMA3CQ99985 751 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 RHNO1Q9BSD3 238 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 RAB6CQ9H0N0 254 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 SLC25A18Q9H1K4 315 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 RANBP17Q9H2T7 1088 aaKnown RBP2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 MAGIXQ9H6Y5 334 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 ECHDC1Q9NTX5 307 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 PTTG2Q9NZH5 202 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms