RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CETN2P41208 172 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 CLK1P49759 484 aaKnown RBP3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 NPY4RP50391 375 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 NR0B1P51843 470 aaKnown RBP3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 CRIP2P52943 208 aaPredicted RBP3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 GNB1P62873 340 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 MYL7Q01449 175 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 MZT1Q08AG7 82 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 TRAP1Q12931 704 aaKnown RBP3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 TUBB2AQ13885 445 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 HERC3Q15034 1050 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 XKR6Q5GH73 641 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ADAM5Q6NVV9 412 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ARHGAP11AQ6P4F7 1023 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ZNF449Q6P9G9 518 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 DNAJB7Q7Z6W7 309 aaPredicted RBP3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 AMIGO1Q86WK6 493 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 IQCA1Q86XH1 822 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 Q8NFD4 153 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 SLC26A7Q8TE54 656 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 DEPDC1BQ8WUY9 529 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ARHGAP45Q92619 1136 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ERO1AQ96HE7 468 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 GMPPAQ96IJ6 420 aaPredicted RBP3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ASCL2Q99929 193 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 TUBB2BQ9BVA1 445 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 P2RY12Q9H244 342 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 SNX25Q9H3E2 840 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 FZD8Q9H461 694 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ACTL8Q9H568 366 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 ZNF696Q9H7X3 374 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 DBNDD1Q9H9R9 158 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 DNAJC4Q9NNZ3 241 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 MRGBPQ9NV56 204 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 TNNQ9UQP3 1299 aa3.38□□□□□ -1.87
LSM1P1-201ENST00000438629 A0A1W2PPK0 400 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 A0A1W2PPW3 197 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 PSMA7O14818 248 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 EXTL3O43909 919 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 SIX3O95343 332 aaPredicted RBP3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 RAF1P04049 648 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 VIMP08670 466 aaKnown RBP3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 CFC1BP0CG36 223 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 CFC1P0CG37 223 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 PRKAR1AP10644 381 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 GLULP15104 373 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 SSR1P43307 286 aaKnown RBP3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 RGS7P49802 495 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 CLDN15P56746 228 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 UBASH3AP57075 661 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 SCN1BQ07699 218 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 WASHC5Q12768 1159 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 PTGISQ16647 500 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 UGP2Q16851 508 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 LRRC73Q5JTD7 316 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 FFAR4Q5NUL3 377 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 CCDC91Q7Z6B0 441 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 NRARPQ7Z6K4 114 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 DZIP1Q86YF9 867 aaKnown RBP3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 LMNTD2Q8IXW0 634 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 WDSUB1Q8N9V3 476 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 TMEM178AQ8NBL3 297 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 ZNF248Q8NDW4 579 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 DBF4BQ8NFT6 615 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 OR4C3Q8NH37 302 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 CCDC47Q96A33 483 aaKnown RBP3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 MAGED4Q96JG8 741 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 LITAFQ99732 161 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 MAP3K3Q99759 626 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 NKX3-1Q99801 234 aaPredicted RBP3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 CITED2Q99967 270 aaPredicted RBP3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 KATNB1Q9BVA0 655 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 SLC2A11Q9BYW1 496 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 SDCBP2Q9H190 292 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 GRPEL1Q9HAV7 217 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 ZNF71Q9NQZ8 489 aaPredicted RBP3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 DDX43Q9NXZ2 648 aaKnown RBP3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 ODF2LQ9ULJ1 636 aa3.37□□□□□ -1.87
LSM1P1-201ENST00000438629 WDR81Q562E7 1941 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 MSGN1A6NI15 193 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 HMMRO75330 724 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 GSRP00390 522 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 C9P02748 559 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 VTNP04004 478 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 GBAP04062 536 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 GPIP06744 558 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 SPP1P10451 314 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 AZGP1P25311 298 aaKnown RBP3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 ATP5DP30049 168 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 MFAP3P55082 362 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 MTCP1P56278 107 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 SNRPD1P62314 119 aaKnown RBP3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 CACNG1Q06432 222 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 SULT2A1Q06520 285 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 BFSP1Q12934 665 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 SGCGQ13326 291 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 SQLEQ14534 574 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 OPCMLQ14982 345 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 RBBP7Q16576 425 aa3.36□□□□□ -1.87
LSM1P1-201ENST00000438629 CDO1Q16878 200 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms