RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 MYBL2P10244 700 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 PAMP19021 973 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 CHRM3P20309 590 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 FDXRP22570 491 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 PSMB5P28074 263 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 DCTP40126 519 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 GRIA1P42261 906 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 CRADDP78560 199 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 SARNPP82979 210 aaKnown RBP7.41□□□□□ -1.22
VPS50-203ENST00000436177 OASLQ15646 514 aaKnown RBP7.41□□□□□ -1.22
VPS50-203ENST00000436177 TTLL9Q3SXZ7 439 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 MEI1Q5TIA1 1274 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 CASC4Q6P4E1 433 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 KIRREL2Q6UWL6 708 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 LINC00696Q6ZRV3 163 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 ADCK2Q7Z695 626 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 KBTBD2Q8IY47 623 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 BCORP1Q8N888 145 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 SPC24Q8NBT2 197 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 ST6GALNAC3Q8NDV1 305 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 OR2L3Q8NG85 312 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 OR11G2Q8NGC1 345 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 SUN3Q8TAQ9 357 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 STT3BQ8TCJ2 826 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 GRHL3Q8TE85 626 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 MAIP1Q8WWC4 291 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 NANOS1Q8WY41 292 aaKnown RBP7.41□□□□□ -1.22
VPS50-203ENST00000436177 SMPDL3AQ92484 453 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 ZFYVE21Q9BQ24 234 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 DPH7Q9BTV6 452 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 ACAT2Q9BWD1 397 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 CCDC68Q9H2F9 335 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
VPS50-203ENST00000436177 ZNF160Q9HCG1 818 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 CHRAC1Q9NRG0 131 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 SLC22A11Q9NSA0 550 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 OLAHQ9NV23 265 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 C14orf105Q9NVL8 296 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 SAMD15Q9P1V8 674 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 TRPC4Q9UBN4 977 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 ZC3H7BQ9UGR2 993 aaKnown RBP7.41□□□□□ -1.22
VPS50-203ENST00000436177 GUCA1BQ9UMX6 200 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 RUVBL2Q9Y230 463 aaKnown RBP7.41□□□□□ -1.22
VPS50-203ENST00000436177 OSGIN2Q9Y236 505 aa7.41□□□□□ -1.22
VPS50-203ENST00000436177 DRG1Q9Y295 367 aaKnown RBP7.41□□□□□ -1.22
VPS50-203ENST00000436177 SHANK1Q9Y566 2161 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 FITM1A5D6W6 292 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 TXNDC9O14530 226 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 SOCS6O14544 535 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 PCDH17O14917 1159 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 LRRTM2O43300 516 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 CTSVO60911 334 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 VAPBO95292 243 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 ONECUT2O95948 504 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 ESR1P03372 595 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 HEXBP07686 556 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 ZGLP1P0C6A0 271 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 EDN3P14138 238 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 PKMP14618 531 aaKnown RBP7.4□□□□□ -1.22
VPS50-203ENST00000436177 RPS3P23396 243 aaKnown RBP eCLIP7.4□□□□□ -1.22
VPS50-203ENST00000436177 ATP5DP30049 168 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 FMO4P31512 558 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 HSD17B2P37059 387 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 NPY2RP49146 381 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 EMP2P54851 167 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 CDK16Q00536 496 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 KLC1Q07866 573 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 MFAP5Q13361 173 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 SEMA3AQ14563 771 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 ANKRD20A4Q4UJ75 823 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 CRB2Q5IJ48 1285 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 THEMIS2Q5TEJ8 643 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 COX15Q7KZN9 410 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 RNF44Q7L0R7 432 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 CSNK1A1LQ8N752 337 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 OR1N1Q8NGS0 311 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 HMGCLL1Q8TB92 370 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.4□□□□□ -1.22
VPS50-203ENST00000436177 INPP5DQ92835 1189 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 FAM136AQ96C01 138 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 MVB12AQ96EY5 273 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 ZNF285Q96NJ3 590 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 TCF12Q99081 682 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 MENTQ9BUN1 341 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.4□□□□□ -1.22
VPS50-203ENST00000436177 RUBCNLQ9H714 662 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 ZBTB20Q9HC78 741 aaPredicted RBP7.4□□□□□ -1.22
VPS50-203ENST00000436177 MRPS30Q9NP92 439 aaKnown RBP7.4□□□□□ -1.22
VPS50-203ENST00000436177 HOMER3Q9NSC5 361 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 ABCF3Q9NUQ8 709 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 RIC8BQ9NVN3 520 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 PTGFRNQ9P2B2 879 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 SUCOQ9UBS9 1254 aaKnown RBP7.4□□□□□ -1.22
VPS50-203ENST00000436177 TEKT2Q9UIF3 430 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 NTNG1Q9Y2I2 539 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 NFS1Q9Y697 457 aa7.4□□□□□ -1.22
VPS50-203ENST00000436177 LRBAP50851 2863 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 LOC105369274A0A096LPK9 316 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 TRAV17A0A0B4J275 112 aa7.39□□□□□ -1.23
VPS50-203ENST00000436177 LOC102723532A0A0G2JNH3 316 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms