RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 MAP3K7O43318 606 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 NRP2O60462 931 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 DKK1O94907 266 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 ZBTB11O95625 1053 aaPredicted RBP14.76□□□□□ -0.05
CNOT9-205ENST00000433439 EPB42P16452 691 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 IMPDH1P20839 514 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 CSTF2P33240 577 aaKnown RBP eCLIP14.76□□□□□ -0.05
CNOT9-205ENST00000433439 MLLT3P42568 568 aaPredicted RBP14.76□□□□□ -0.05
CNOT9-205ENST00000433439 CDH13P55290 713 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 HERVK_113P63132 956 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 ABATP80404 500 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 NFKB2Q00653 900 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 MEF2AQ02078 507 aaPredicted RBP14.76□□□□□ -0.05
CNOT9-205ENST00000433439 ZFP36L1Q07352 338 aaKnown RBP14.76□□□□□ -0.05
CNOT9-205ENST00000433439 COL9A2Q14055 689 aaPredicted RBP14.76□□□□□ -0.05
CNOT9-205ENST00000433439 KCNAB1Q14722 419 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 C16orf72Q14CZ0 275 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 RBBP7Q16576 425 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 UNC50Q53HI1 259 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 CFAP157Q5JU67 520 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 CATSPEREQ5SY80 951 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 CDCP2Q5VXM1 449 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 FOXR1Q6PIV2 292 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 PRSS42Q7Z5A4 293 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 GOLGA7Q7Z5G4 137 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 FAM129CQ86XR2 697 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 MYLK4Q86YV6 388 aaPredicted RBP14.76□□□□□ -0.05
CNOT9-205ENST00000433439 NUDCD3Q8IVD9 361 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 C19orf47Q8N9M1 422 aaKnown RBP14.76□□□□□ -0.05
CNOT9-205ENST00000433439 PPP1R14CQ8TAE6 165 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 MDM1Q8TC05 714 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 ADAMTS14Q8WXS8 1223 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 ERVK-6Q9BXR3 956 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 PITPNM3Q9BZ71 974 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 STRADBQ9C0K7 418 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 OXSMQ9NWU1 459 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 CEP250Q9BV73 2442 aa14.76□□□□□ -0.05
CNOT9-205ENST00000433439 SNRNP200O75643 2136 aaKnown RBP14.75□□□□□ -0.05
CNOT9-205ENST00000433439 E2F3O00716 465 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 TRIM13O60858 407 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 KATNA1O75449 491 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 FKBP9O95302 570 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 BPGMP07738 259 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 RPS17P08708 135 aaKnown RBP14.75□□□□□ -0.05
CNOT9-205ENST00000433439 GNAZP19086 355 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 VARSP26640 1264 aaKnown RBP14.75□□□□□ -0.05
CNOT9-205ENST00000433439 ETV4P43268 484 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 SERPINB4P48594 390 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 NAGLUP54802 743 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 FOXC1Q12948 553 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 TARDBPQ13148 414 aaKnown RBP eCLIP14.75□□□□□ -0.05
CNOT9-205ENST00000433439 ZIC1Q15915 447 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 ST3GAL2Q16842 350 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 DEFB110Q30KQ9 67 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 XKR6Q5GH73 641 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 ZNF678Q5SXM1 525 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 LIPMQ5VYY2 423 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 FCRL6Q6DN72 434 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 ZCCHC23Q6ZST2 131 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 ARHGAP22Q7Z5H3 698 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 PLD3Q8IV08 490 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 KLHDC8AQ8IYD2 350 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 DCBLD1Q8N8Z6 715 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 TRPC4APQ8TEL6 797 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 SREK1Q8WXA9 508 aaKnown RBP14.75□□□□□ -0.05
CNOT9-205ENST00000433439 N4BP2L2Q92802 583 aaPredicted RBP14.75□□□□□ -0.05
CNOT9-205ENST00000433439 TWSG1Q9GZX9 223 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 ZNF768Q9H5H4 540 aaKnown RBP14.75□□□□□ -0.05
CNOT9-205ENST00000433439 NOL11Q9H8H0 719 aaKnown RBP14.75□□□□□ -0.05
CNOT9-205ENST00000433439 IPPKQ9H8X2 491 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 PDE7BQ9NP56 450 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 AKAP7Q9P0M2 348 aaPredicted RBP14.75□□□□□ -0.05
CNOT9-205ENST00000433439 PDP2Q9P2J9 529 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 PCTPQ9UKL6 214 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 SNX7Q9UNH6 387 aa14.75□□□□□ -0.05
CNOT9-205ENST00000433439 IGKV1-8A0A0C4DH67 115 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 A0A0J9YVX5 310 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 EFCAB7A8K855 629 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 H3BQF6 201 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 H2AFYO75367 372 aaKnown RBP14.74□□□□□ -0.05
CNOT9-205ENST00000433439 EBLN1P0CF75 366 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 CCKBRP32239 447 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 PIK3CGP48736 1102 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 CCR8P51685 355 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 PPP2R2AP63151 447 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 SH3BP2P78314 561 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 HSD11B2P80365 405 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 IRF8Q02556 426 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 CLCQ05315 142 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 FOXM1Q08050 763 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 CYP4F3Q08477 520 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 ASPHQ12797 758 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 CHIT1Q13231 466 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 TRA2AQ13595 282 aaKnown RBP eCLIP14.74□□□□□ -0.05
CNOT9-205ENST00000433439 TMTC4Q5T4D3 741 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 NXPE4Q6UWF7 544 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 TMPRSS12Q86WS5 348 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 AGBL5Q8NDL9 886 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 KLHL6Q8WZ60 621 aa14.74□□□□□ -0.05
CNOT9-205ENST00000433439 L3HYPDHQ96EM0 354 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms