RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 PCDHGA9Q9Y5G4 932 aaKnown RBP11.96□□□□□ -0.49
SMPD4-204ENST00000430682 MRFAP1Q9Y605 127 aa11.96□□□□□ -0.49
SMPD4-204ENST00000430682 PSAT1Q9Y617 370 aa11.96□□□□□ -0.49
SMPD4-204ENST00000430682 MAU2Q9Y6X3 613 aa11.96□□□□□ -0.49
SMPD4-204ENST00000430682 NBPF19A0A087WUL8 3843 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 A0A1B0GX78 115 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 HYKKA2RU49 373 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 H0YGG7 62 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 FFAR3O14843 346 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 GPR42O15529 346 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 P2RX6O15547 441 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 SEC31AO94979 1220 aaKnown RBP11.95□□□□□ -0.5
SMPD4-204ENST00000430682 SYF2O95926 243 aaKnown RBP11.95□□□□□ -0.5
SMPD4-204ENST00000430682 STATHP02808 62 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 EIF2S1P05198 315 aaKnown RBP11.95□□□□□ -0.5
SMPD4-204ENST00000430682 CMPK1P30085 196 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 RPA3P35244 121 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-204ENST00000430682 FOLR3P41439 243 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 CD97P48960 835 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 ARF3P61204 181 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-204ENST00000430682 PRDX1Q06830 199 aaKnown RBP11.95□□□□□ -0.5
SMPD4-204ENST00000430682 SSPNQ14714 243 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 GRM7Q14831 915 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 ARHGAP19Q14CB8 494 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 MORF4L2Q15014 288 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 PHKG1Q16816 387 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 HKDC1Q2TB90 917 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 PRTGQ2VWP7 1150 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 TTLL9Q3SXZ7 439 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 TCTE1Q5JU00 501 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 STEAP4Q687X5 459 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 UBE2R2Q712K3 238 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-204ENST00000430682 PCGF5Q86SE9 256 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 CALML6Q8TD86 181 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 OR2A5Q96R48 311 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 KRT12Q99456 494 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 OLFM1Q99784 485 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 ZFYVE21Q9BQ24 234 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 CCDC68Q9H2F9 335 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 ZBTB20Q9HC78 741 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-204ENST00000430682 MRPS30Q9NP92 439 aaKnown RBP11.95□□□□□ -0.5
SMPD4-204ENST00000430682 P4HTMQ9NXG6 502 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 GPN3Q9UHW5 284 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-204ENST00000430682 PDE10AQ9Y233 779 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 SNX24Q9Y343 169 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 MRPS2Q9Y399 296 aaKnown RBP11.95□□□□□ -0.5
SMPD4-204ENST00000430682 COMMD10Q9Y6G5 202 aa11.95□□□□□ -0.5
SMPD4-204ENST00000430682 SVILO95425 2214 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 VSTM2BA6NLU5 285 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 CYSRT1A8MQ03 144 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 SMAPO00193 183 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 SOCS6O14544 535 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 HAT1O14929 419 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 SRPX2O60687 465 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-204ENST00000430682 VPS26AO75436 327 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 PIAS1O75925 651 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 TTC4O95801 387 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 ENO3P13929 434 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-204ENST00000430682 PGDP52209 483 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 EFNA3P52797 238 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 ARSFP54793 590 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 SRSF1Q07955 248 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMPD4-204ENST00000430682 DCAF10Q5QP82 559 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 TMEM207Q6UWW9 146 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 MED25Q71SY5 747 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 RAB43Q86YS6 212 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 RAB42Q8N4Z0 105 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 RBMXL3Q8N7X1 1067 aaKnown RBP11.94□□□□□ -0.5
SMPD4-204ENST00000430682 TMEM102Q8N9M5 508 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-204ENST00000430682 TEX19Q8NA77 164 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 Q8NA96 180 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 PTERQ96BW5 349 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 SLC26A1Q9H2B4 701 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 SOX17Q9H6I2 414 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-204ENST00000430682 FAM114A2Q9NRY5 505 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 LUZP4Q9P127 313 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 TRMT6Q9UJA5 497 aaKnown RBP11.94□□□□□ -0.5
SMPD4-204ENST00000430682 RUVBL1Q9Y265 456 aaKnown RBP11.94□□□□□ -0.5
SMPD4-204ENST00000430682 PADI2Q9Y2J8 665 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 HS3ST3B1Q9Y662 390 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.94□□□□□ -0.54e-7■□□□□ 10.9
SMPD4-204ENST00000430682 MAST4O15021 2626 aa11.94□□□□□ -0.5
SMPD4-204ENST00000430682 SPTBN1Q01082 2364 aaKnown RBP11.93□□□□□ -0.5
SMPD4-204ENST00000430682 CPAMD8Q8IZJ3 1885 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 NAV2Q8IVL1 2488 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 E7ESA3 106 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 FOXS1O43638 330 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 ZBTB14O43829 449 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 TBPL1P62380 186 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 HIF1AQ16665 826 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 PRR30Q53SZ7 412 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-204ENST00000430682 HECTD2Q5U5R9 776 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 YOD1Q5VVQ6 348 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-204ENST00000430682 SYDE1Q6ZW31 735 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-204ENST00000430682 VN1R4Q7Z5H5 301 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 LAPTM4BQ86VI4 370 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 PDIK1LQ8N165 341 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 TTC29Q8NA56 475 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-204ENST00000430682 MIB2Q96AX9 1013 aa11.93□□□□□ -0.5
SMPD4-204ENST00000430682 FKBP10Q96AY3 582 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms