RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 RPL4P36578 427 aaKnown RBP12.56□□□□□ -0.4
PTCH1-207ENST00000429896 SEMA3BQ13214 749 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 HTR4Q13639 388 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 DEFB133Q30KQ1 61 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF549Q6P9A3 640 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 FATE1Q969F0 183 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 CMTM7Q96FZ5 175 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 DUSP23Q9BVJ7 150 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 MUTYHQ9UIF7 546 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 LOC285095A0A1B0GVY8 99 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 ACTRT2Q8TDY3 377 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 PYDC1Q8WXC3 89 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 JPH3Q8WXH2 748 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-207ENST00000429896 MRPL48Q96GC5 212 aaKnown RBP12.55□□□□□ -0.4
PTCH1-207ENST00000429896 TRIB3Q96RU7 358 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 RPRD1BQ9NQG5 326 aaKnown RBP12.55□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF232Q9UNY5 417 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 GJB3O75712 270 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 CLPTM1O96005 669 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 HSPA13P48723 471 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 RPA4Q13156 261 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 NFATC4Q14934 902 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 AMIGO1Q86WK6 493 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 RELL1Q8IUW5 271 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 GATA5Q9BWX5 397 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-207ENST00000429896 SLC6A17Q9H1V8 727 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 MAOBP27338 520 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 GSTM5P46439 218 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 TOR1AIP1Q5JTV8 583 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 NUDT13Q86X67 352 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 CEP76Q8TAP6 659 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 RGMAQ96B86 450 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 CDRT15Q96T59 188 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 PDE7BQ9NP56 450 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 COPS7AQ9UBW8 275 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 SATB2Q9UPW6 733 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 PCDHGB3Q9Y5G1 929 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 DNMT3AQ9Y6K1 912 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-207ENST00000429896 CBX6O95503 412 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 EPHA5P54756 1037 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 SCRN3Q0VDG4 424 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 GPNMBQ14956 572 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 PTCHD3Q3KNS1 767 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 TMEM31Q5JXX7 168 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 INTS11Q5TA45 600 aaKnown RBP12.55□□□□□ -0.4
PTCH1-207ENST00000429896 UNC5DQ6UXZ4 953 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 KIAA1958Q8N8K9 716 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 BHLHE22Q8NFJ8 381 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-207ENST00000429896 TMA7Q9Y2S6 64 aaKnown RBP12.55□□□□□ -0.4
PTCH1-207ENST00000429896 A0A0U1RQS6 177 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 HRH2P25021 359 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 FNTBP49356 437 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 COPZ1P61923 177 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 CCINQ13939 588 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 NFE2L1Q14494 772 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF544Q6NX49 715 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 SYCE2Q6PIF2 218 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF765Q7L2R6 523 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 IQCF2Q8IXL9 164 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 TEX26Q8N6G2 289 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 MTERF1Q99551 399 aaKnown RBP12.55□□□□□ -0.4
PTCH1-207ENST00000429896 AP4S1Q9Y587 144 aa12.55□□□□□ -0.4
PTCH1-207ENST00000429896 PNMA8CA0A1B0GUJ8 204 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 A8MT66 165 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 RFXANKO14593 260 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 CCNYL3P0C7X3 344 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 LEXMQ3ZCV2 418 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 SUSD1Q6UWL2 747 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 PLXDC1Q8IUK5 500 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 KIAA1143Q96AT1 154 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF358Q9NW07 568 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 ANAPC2Q9UJX6 822 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 PSAT1Q9Y617 370 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 PRSS38A1L453 326 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 PRRT4C9JH25 899 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 NR2F1P10589 423 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 YPEL5P62699 121 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF155Q12901 538 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 HEPACAMQ14CZ8 416 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 ARHGAP40Q5TG30 622 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF605Q86T29 641 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 SAMD14Q8IZD0 417 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 SPEM1Q8N4L4 309 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 OR6Y1Q8NGX8 325 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 C7orf26Q96N11 449 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 SPATA5L1Q9BVQ7 753 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 EBPLQ9BY08 206 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF304Q9HCX3 659 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 SLC35C2Q9NQQ7 365 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 ATXN10Q9UBB4 475 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 FADS3Q9Y5Q0 445 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 A0A1B0GTW7 788 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 E7ESA3 106 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 MATN2O00339 956 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 TBX10O75333 385 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 RPS3P23396 243 aaKnown RBP eCLIP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 TPMTP51580 245 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 GOLGA7Q7Z5G4 137 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 PGBD5Q8N414 524 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 TRPV3Q8NET8 790 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms