RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 TGFB1P01137 390 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 SLC11A1P49279 550 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 NOXRED1Q6NXP6 359 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 SPRED1Q7Z699 444 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 PGBD5Q8N414 524 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 OR4K1Q8NGD4 311 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 PKP4Q99569 1192 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 HTATIP2Q9BUP3 242 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 HMX1Q9NP08 348 aaPredicted RBP12.28□□□□□ -0.44
CPNE4-201ENST00000429747 SEMA3GQ9NS98 782 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 ABCB8Q9NUT2 735 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 ADAM30Q9UKF2 790 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 A0A096LPI6 279 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 QSOX1O00391 747 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 CASKO14936 926 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 COCHO43405 550 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 LCKP06239 509 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 DCKP27707 260 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 CDK5R2Q13319 367 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 SPCS2Q15005 226 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 TCEA2Q15560 299 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 TSTQ16762 297 aaKnown RBP12.28□□□□□ -0.44
CPNE4-201ENST00000429747 RGMBQ6NW40 437 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 NXPE1Q8N323 547 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 CHDHQ8NE62 594 aaPredicted RBP12.28□□□□□ -0.44
CPNE4-201ENST00000429747 NDNFQ8TB73 568 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 INPP5KQ9BT40 448 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 POLR2J2Q9GZM3 115 aaKnown RBP12.28□□□□□ -0.44
CPNE4-201ENST00000429747 SERHL2Q9H4I8 314 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 SERHLQ9NQF3 203 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 GJD2Q9UKL4 321 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 KRBA1A5PL33 1030 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 MROH6A6NGR9 719 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 M0QZQ0 153 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 ATG13O75143 517 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 PGFP49763 221 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 CLCN4P51793 760 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 OR2B6P58173 313 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 GPAT3Q53EU6 434 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 DCST1Q5T197 706 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 LRRC66Q68CR7 880 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 ZFP90Q8TF47 636 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 COL26A1Q96A83 441 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 EXOSC8Q96B26 276 aaKnown RBP12.28□□□□□ -0.44
CPNE4-201ENST00000429747 AP2M1Q96CW1 435 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 CDV3Q9UKY7 258 aaKnown RBP12.28□□□□□ -0.44
CPNE4-201ENST00000429747 SLC45A1Q9Y2W3 748 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 ANKRD33BA6NCL7 494 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 SERPINB7O75635 380 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 SELPP16109 830 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 SCARB2Q14108 478 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 SNAPC1Q16533 368 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 IQCCQ4KMZ1 466 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 TBPL2Q6SJ96 375 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.27□□□□□ -0.44
CPNE4-201ENST00000429747 LRRC70Q7Z2Q7 622 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 DCP2Q8IU60 420 aaKnown RBP12.27□□□□□ -0.44
CPNE4-201ENST00000429747 ALDH16A1Q8IZ83 802 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 OR2T11Q8NH01 316 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 TMEM203Q969S6 136 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 TEFMQ96QE5 360 aaKnown RBP12.27□□□□□ -0.44
CPNE4-201ENST00000429747 SLC35A5Q9BS91 424 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 MCMBPQ9BTE3 642 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 TVP23BQ9NYZ1 205 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 RHCGQ9UBD6 479 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 GULP1Q9UBP9 304 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 ZNF282Q9UDV7 671 aaPredicted RBP12.27□□□□□ -0.44
CPNE4-201ENST00000429747 MALT1Q9UDY8 824 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 SLC9A8Q9Y2E8 581 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 PMF1-BGLAPU3KQ54 211 aa12.27□□□□□ -0.44
CPNE4-201ENST00000429747 ACOX3O15254 700 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 ZW10O43264 779 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 UGT2B17O75795 530 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 ALPLP05186 524 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 FEN1P39748 380 aaKnown RBP12.27□□□□□ -0.45
CPNE4-201ENST00000429747 RPL34P49207 117 aaKnown RBP12.27□□□□□ -0.45
CPNE4-201ENST00000429747 SMIM11AP58511 58 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 SRP54P61011 504 aaKnown RBP12.27□□□□□ -0.45
CPNE4-201ENST00000429747 PRKCZQ05513 592 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 HSPB3Q12988 150 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 LDLRAD1Q5T700 205 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 ATAD3BQ5T9A4 648 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 MZT2BQ6NZ67 158 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 DNAJB7Q7Z6W7 309 aaPredicted RBP12.27□□□□□ -0.45
CPNE4-201ENST00000429747 SLC22A15Q8IZD6 547 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 SLC22A17Q8WUG5 538 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 CMTM7Q96FZ5 175 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 SH3YL1Q96HL8 342 aaPredicted RBP12.27□□□□□ -0.45
CPNE4-201ENST00000429747 ZNF607Q96SK3 696 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 WRAP53Q9BUR4 548 aaKnown RBP12.27□□□□□ -0.45
CPNE4-201ENST00000429747 SUV39H2Q9H5I1 410 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 OARD1Q9Y530 152 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 TMX2-CTNND1H3BSU7 103 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 MTHFD2P13995 350 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 SLC15A1P46059 708 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 NKX2-5P52952 324 aaPredicted RBP12.27□□□□□ -0.45
CPNE4-201ENST00000429747 INHBEP58166 350 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 NDUFA5Q16718 116 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 TMEM220Q6QAJ8 160 aa12.27□□□□□ -0.45
CPNE4-201ENST00000429747 USP30Q70CQ3 517 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms