RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 SERPINA11Q86U17 422 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 DCP2Q8IU60 420 aaKnown RBP8.47□□□□□ -1.05
GABPB1-205ENST00000429662 ZC3H7AQ8IWR0 971 aaKnown RBP8.47□□□□□ -1.05
GABPB1-205ENST00000429662 RGL4Q8IZJ4 473 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PARP8Q8N3A8 854 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 VN1R2Q8NFZ6 395 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PIH1D2Q8WWB5 315 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 NCLNQ969V3 563 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 CMTM7Q96FZ5 175 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 EXOC2Q96KP1 924 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 CASD1Q96PB1 797 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 LYSMD1Q96S90 227 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 CPPED1Q9BRF8 314 aaPredicted RBP8.47□□□□□ -1.05
GABPB1-205ENST00000429662 CEP44Q9C0F1 390 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 CRISPLD1Q9H336 500 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 ASB8Q9H765 288 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PARVBQ9HBI1 364 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 DNMT3BQ9UBC3 853 aaKnown RBP8.47□□□□□ -1.05
GABPB1-205ENST00000429662 MTRRQ9UBK8 725 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 KLQ9UEF7 1012 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 WARS2Q9UGM6 360 aaKnown RBP8.47□□□□□ -1.05
GABPB1-205ENST00000429662 AFF4Q9UHB7 1163 aaKnown RBP8.47□□□□□ -1.05
GABPB1-205ENST00000429662 ZMYM5Q9UJ78 669 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 CRLS1Q9UJA2 301 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 USP22Q9UPT9 525 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 COQ6Q9Y2Z9 468 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 NEUROG3Q9Y4Z2 214 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PCDHB9Q9Y5E1 797 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PCDHGA8Q9Y5G5 932 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 V9GYQ6 96 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 MAST4O15021 2626 aa8.46□□□□□ -1.05
GABPB1-205ENST00000429662 GLYATL1P3A0A0U1RQE8 302 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 SLC1A7O00341 560 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 BCKDKO14874 412 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 KPNA5O15131 536 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 HS6ST1O60243 411 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 SULT1C4O75897 302 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 TRIM16O95361 564 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 CD160O95971 181 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 TRBC1P01850 177 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 MT-ND1P03886 318 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 KLKB1P03952 638 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 UGT2B4P06133 528 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 GALTP07902 379 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 HIST1H2AGP0C0S8 130 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 BCKDHAP12694 445 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 TCF3P15923 654 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 ZNF182P17025 639 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 HIST1H2ADP20671 130 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 PPIBP23284 216 aaKnown RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 YAP1P46937 504 aaKnown RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 GZMMP51124 257 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 SRSF11Q05519 484 aaKnown RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 CD47Q08722 323 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 LRRC74AQ0VAA2 488 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 CDK5R2Q13319 367 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 SP140Q13342 867 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 BOP1Q14137 746 aaKnown RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 VEPH1Q14D04 833 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 TAF12Q16514 161 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 SPANXN4Q5MJ08 99 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 RTP2Q5QGT7 225 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 FAM219BQ5XKK7 198 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 TPGS2Q68CL5 300 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 SPESP1Q6UW49 350 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 ENPP6Q6UWR7 440 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 XKR5Q6UX68 686 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 NPAS4Q8IUM7 802 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 MSRB3Q8IXL7 192 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 CENPSQ8N2Z9 138 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 FAM160A2Q8N612 972 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 BEND7Q8N7W2 519 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 ZNF513Q8N8E2 541 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 ZBTB8BQ8NAP8 495 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 BPIFB6Q8NFQ5 453 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 CSGALNACT1Q8TDX6 532 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 IPCEF1Q8WWN9 437 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 RORBQ92753 470 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 FKBP10Q96AY3 582 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 HIST1H2AHQ96KK5 128 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 HIST1H2AJQ99878 128 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 H2AFJQ9BTM1 129 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 C2orf49Q9BVC5 232 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 FUNDC2Q9BWH2 189 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 ASPSCR1Q9BZE9 553 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 AMBRA1Q9C0C7 1298 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 NAA50Q9GZZ1 169 aaKnown RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 SOX17Q9H6I2 414 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 SMURF2Q9HAU4 748 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 ELOVL2Q9NXB9 296 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 ZDHHC3Q9NYG2 299 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 SLC25A37Q9NYZ2 338 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 MAFFQ9ULX9 164 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 CORO2BQ9UQ03 480 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 FCF1Q9Y324 198 aaKnown RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 OR51B4Q9Y5P0 310 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 HEMK1Q9Y5R4 338 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-205ENST00000429662 ACTL7AQ9Y615 435 aa8.46□□□□□ -1.06
GABPB1-205ENST00000429662 DSPP15924 2871 aaKnown RBP8.45□□□□□ -1.06
GABPB1-205ENST00000429662 BPTFQ12830 3046 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms