RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SRYQ05066 204 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 SLC14A1Q13336 389 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 CWF19L1Q69YN2 538 aaKnown RBP7.03□□□□□ -1.28
CNOT4-206ENST00000428680 KYAT3Q6YP21 454 aaKnown RBP7.03□□□□□ -1.28
CNOT4-206ENST00000428680 RASSF6Q6ZTQ3 369 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 KCTD8Q6ZWB6 473 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 CILP2Q8IUL8 1156 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 OR9A1PQ8NGU1 263 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 OR2AJ1Q8NGZ0 328 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 PHOSPHO1Q8TCT1 267 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 CDKN2AIPNLQ96HQ2 116 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 QKIQ96PU8 341 aaKnown RBP eCLIP7.03□□□□□ -1.284e-9■■■■□ 24.8
CNOT4-206ENST00000428680 SLC38A2Q96QD8 506 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 FCRL5Q96RD9 977 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 TMEM248Q9NWD8 314 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ADGRE2Q9UHX3 823 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 CROTQ9UKG9 612 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ARL5AQ9Y689 179 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ARID2Q68CP9 1835 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 TULP2O00295 520 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 HCN1O60741 890 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 AP2A2O94973 939 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 AHSA1O95433 338 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ICAM2P13598 275 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 GSSP48637 474 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 SLC1A6P48664 564 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 DSG2Q14126 1118 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 MAPK14Q16539 360 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 TMIGD1Q6UXZ0 262 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 RAB11FIP2Q7L804 512 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 RANBP3LQ86VV4 465 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-206ENST00000428680 MINDY1Q8N5J2 469 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 PRELID2Q8N945 189 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 TOR1AIP2Q8NFQ8 470 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 NLGN4YQ8NFZ3 816 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-206ENST00000428680 OR14L1PQ8NHC6 308 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 CLHC1Q8NHS4 586 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 SNX33Q8WV41 574 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 SLC35F5Q8WV83 523 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 TNFRSF25Q93038 417 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF707Q96C28 371 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-206ENST00000428680 MOCOSQ96EN8 888 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ITCHQ96J02 903 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 OR1F2PQ96R84 312 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 C1orf50Q9BV19 199 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 SLC25A23Q9BV35 468 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 FGFBP2Q9BYJ0 223 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ATP13A2Q9NQ11 1180 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 KLHL1Q9NR64 748 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 MS4A12Q9NXJ0 267 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 MMP17Q9ULZ9 603 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 NUMA1Q14980 2115 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ACACAQ13085 2346 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 CCDC162PA2VCL2 907 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 BTNL10A8MVZ5 291 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 FLRT2O43155 660 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 OR10H3O60404 316 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 STX11O75558 287 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 SEC24AO95486 1093 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 TGFB1P01137 390 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 NCBP2P52298 156 aaKnown RBP eCLIP7.02□□□□□ -1.28
CNOT4-206ENST00000428680 KLHL12Q53G59 568 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 PRMT9Q6P2P2 845 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 LRIG3Q6UXM1 1119 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 TRAM1L1Q8N609 369 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 C4orf32Q8N8J7 132 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 TMEM105Q8N8V8 129 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 ZC3H10Q96K80 434 aaKnown RBP7.02□□□□□ -1.28
CNOT4-206ENST00000428680 MYLK2Q9H1R3 596 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 MRM3Q9HC36 420 aaKnown RBP7.02□□□□□ -1.28
CNOT4-206ENST00000428680 DLL3Q9NYJ7 618 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 PPP4R1LQ9P1A2 415 aa7.02□□□□□ -1.28
CNOT4-206ENST00000428680 RCCD1A6NED2 376 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 PDPK1O15530 556 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 PGLSO95336 258 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 VNN1O95497 513 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 ITGA2BP08514 1039 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 GP1BBP13224 206 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 ZNF28P17035 718 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 BGNP21810 368 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 SHC2P98077 582 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 RHAGQ02094 409 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 RAPSNQ13702 412 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 TLR1Q15399 786 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 FOXR2Q6PJQ5 311 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 RNF111Q6ZNA4 994 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 TMEM26Q6ZUK4 368 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 DCBLD1Q8N8Z6 715 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 LSM14AQ8ND56 463 aaKnown RBP7.02□□□□□ -1.29
CNOT4-206ENST00000428680 CCDC54Q8NEL0 328 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 GOT1L1Q8NHS2 421 aaPredicted RBP7.02□□□□□ -1.29
CNOT4-206ENST00000428680 PCDH19Q8TAB3 1148 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 TMCO6Q96DC7 493 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 TRMOQ9BU70 441 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 RIBC2Q9H4K1 309 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 NOL11Q9H8H0 719 aaKnown RBP7.02□□□□□ -1.29
CNOT4-206ENST00000428680 TIMMDC1Q9NPL8 285 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 RPS6KA6Q9UK32 745 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 PLAGL1Q9UM63 463 aa7.02□□□□□ -1.29
CNOT4-206ENST00000428680 PCDHGA6Q9Y5G7 932 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms